Gene Avin_28000 details

Gene Information

• Locus tag: Avin_28000
• Symbol: treS
• ID: 7761705
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 2883302
• End bp: 2886628
• Gene Length: 3327 bp
• Protein Length: 1108 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643805679
• Product: trehalose synthase, maltokinase fusion protein
• Protein accession: YP_002799947
• Protein GI: 226944874
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0366] Glycosidases
• TIGRFAM ID: [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; [TIGR02456] trehalose synthase; [TIGR02457] trehalose synthase-fused probable maltokinase

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCAAT CGCTCAAGTC CGTCGCCTTT CTCGAGGACC CGTTCTGGTA CAAGGACGCG 
GTGATCTACC AGGTGCACGT CAAGTCGTTC TTCGACTCGA ACAACGACGG CATCGGTGAT 
TTCCCGGGGC TGATCGCCAA GCTGGACTAC ATCGCCGACC TGGGGGTCAA CACCATCTGG 
CTGCTGCCGT TCTACCCTTC GCCGCGTCGC GACGACGGCT ACGACATCGC CGAATACCGC 
GGCGTGCATC CAGACTACGG CAGCCTCGCC GACGTGCGAC GCCTCATCGC CGAGGCGCAC 
CGGCGCGGCC TGCGGTTGAT CACCGAACTG GTGATCAACC ACACCTCCGA CCAGCATCCC 
TGGTTCCAGC GGGCGCGGCA GGCCAGGAAG GGCTCGGCGG CGCGCAACTT CTACGTCTGG 
TCGGATAGCG ACGACAAGTA CCGGGACACC CGGATCATCT TCCTCGATAC CGAGAAGTCC 
AACTGGACCT GGGACCCGGT GGCCGGCCAG TACTTCTGGC ACCGCTTCTA TTCGCACCAG 
CCGGATCTCA ACTTCGACAA CCCGCAGGTG ATGAAGGCGG TGCTCGGCAT CATGCGCTAC 
TGGCTCGATC TGGGCGTCGA CGGTCTGCGC CTGGACGCCA TTCCCTACCT GATCGAGCGC 
GACGGCACCA ATAACGAGAA CCTGCCCGAG ACCCACCAGG TGCTCAAGCG CATCCGCGCC 
GAGCTGGATG CCCGCTATCC GGACCGCATG CTGCTGGCCG AGGCCAACCA GTGGCCGGAG 
GACACTCAGC TCTACTTCGG CGGCGCCCCG GAGGGGAAGG GCGACGAATG CCACATGGCC 
TTCCACTTCC CGCTGATGCC GCGCATGTAC ATGGCCATCG CCCAGGAAGA CCGCTTCCCG 
ATGACCGACA TCCTGCGCCA GACCCCGGAC ATCCCGTCCG ACTGCCAGTG GGCGATCTTC 
CTGCGCAACC ACGACGAACT GACCCTGGAG ATGGTCACCG ACCGCGAGCG CGACTACCTG 
TGGAACTTCT ACGCCGCCGA CCGCCGCGCG CGGATCAACC TGGGGATACG CCGGCGCCTG 
GCGCCGCTGC TGGAGCGCGA CCGGCGGCGC ATCGAACTGC TCAACAGCCT GCTGCTGTCG 
ATGCCAGGTA CGCCGGTGAT CTACTACGGC GACGAGATCG GCATGGGCGA CAACATCTAC 
CTGGGCGACC GCGACGGGGT GCGCACGCCC ATGCAGTGGA GCACCGACCG CAACGGCGGC 
TTTTCCCGCG CCGATCCGGC CGGACTGGTG CTGCCGCCGA TCATGGACCC GCTGTACGGC 
TTCCAGAGCG TCAACGTCGA AGCCCAGCAG CGCGACAGCT ACTCGCTGCT CAACTGGACC 
CGGCGCATGC TCGCCGTACG CAAGCAGCAG AAGGCCTTCG GCCGCGGCTC GCTGCGGCTG 
CTGGCGCCGG CCAACCGGCG CATCTTCGCC TACCTGCGCG AATACCATGG CGCGGACGGC 
AGCAGCGAGA CCATCCTCTG CGTGGCCAAC GTCTCGCGCT CGGCCCAGGC GGTGGAACTG 
GAACTGCCCC AGTTCGCCGA CATGGTGCCG GTGGAGATGA CCGGCGGCAG CGCCTTCCCG 
CCGATCGGCC AGTTGCCCTA CCTGCTGACC CTGCCGCCCT ACGGCTTCTG CTGGTTCCTG 
CTGGCGCCCG CGTCGCAGAT GCCCAGTTGG CACATCAAGC CCACCGAAGG CATGCCGGAA 
TTCCAGACCC TGGTGCTGCG GCGTCTCGAC GATCTGCTGG TGGACCCCAA CCGGCGCATC 
CTGGAGAAGG AGGTGTTGCC GGCCTACCTG CCCAAGCGTC GTTGGTTCGC CGGCAAGGGC 
GCGCCCTCGG GCAACGTGCA CATCGCCTAT ACGGTGACCT TCGGCAATCT GCCGCGCCCC 
GTGCTGCTCA GCGAGATCGA GGTCGGCGGC GAGGGCGGCC CGCAGCGCTA CCAGTTGCCG 
CTGGGTTTTC TCCCCGAGGA GGAGTTCGGC AGCGCCTTGC CCCAGCAACT GGCCATGACC 
CGGGTGCGCC GTGGCCGGCG GGTGGGCCTG TTGACCGATG CCTTCACCCT GGAGGGCTTC 
GTCCGCGCGA CGGTCCAGGC GCTGCGCGAG CGCCGCGTGC TGGCCTTCGA GCAGGGCGAG 
CTGCGCTTTC TGCCCACCGC GCAACTGGAC AAGGTCGAGC TGCCGGCCGA CGCCGAGGTG 
CGCTACATCT CCGCCGAGCA ATCCAACAGC TCGGCGGTGC TTGGCAACGC CCTGGTGCTC 
AAGCTGATCC GCCGGGTGTC CGTCGGCGTG CATCCCGAAC TGGAGATGGG CCTGCACCTC 
ACCGGATACG GCTTCGCCAA CATCGCCAGC GTGCTCGGCG AGGTGTGTCG GGTCGATGCC 
CAGGGCGGCT GCACCGTGCT GATGATCCTG CAGCGCTACC TGGAGAACCA GGGCGACGCC 
TGGGAGTGGA CGCAGAACAC CCTCGACCGG GCCATCCGCG ACGAACTGGC CGGCGGCGAG 
TCGACCCTGG AGAGCCAGTA CAGCGCGCTG CACGAGCTGG AGAGCTTTTC CCGCCAGCTC 
GGCCAGCGCC TCGGCGAGAT GCACATGGCC CTGGCCGCGC CCACCGAGGA CCCGGATTTC 
GCTCGCGAAA CCGCCGGTCC CGAGCAAGCG GCGCAGTGGA CCGAGAGCAT CGGCGCGCAA 
CTGGGGCGGG CCCTGGAAAT CCTCGCCCAG CGCCAGGCGA CGCTGGCCGA GGAGGAACGG 
GCCGCCGTCG AGCAGTTGCT GCTGCAGCGT GATGCCCTGC TGGAGAAAGT CGGCGAACTG 
GCCGGGGCCT GCGTCGGCAG CCTGCGCATC CGCGTGCATG GCGATCTGCA CCTCGGCCAG 
GTGCTGGTGG TGCAGGGCGA CGCCTATCTG ATCGACTTCG AGGGCGAGCC GTCGCGGCCG 
CTCGCCGCGC GCCGCGCCAA GCACAGCCCT TACAAGGACG TCAGCGGCGT GCTGCGCTCG 
ATCGGCTACG CCGCCGACAT GGCCATGCGC AACGCGCAGA GTGTCGACAG CTCCGAGGCG 
GCCGACCAGG CCCGTCGGCG CATCGCCTCG CTGTACCAGG CGAACGCCCG CCAGGCCTTC 
CTCGCCGCCT ACCGCCAGGC GGCGGCCGAG ATCGGCCATG CCTGGGCCGT GCCGGACGGC 
GAGGAGGCCG CGCTGGCGCT GTTCAGCCTG GAAAAGACCG CCTACGAAAT CGCCTACGAG 
GCCGAAAACC GCCCCGCCTG GCTGGCCGTA CCGCTGCGGG GCCTGGCGAA TCTGGCGCAA 
CAGCTACTGG ATGGAGAGGC GCAATGA 

 

Protein sequence

MDQSLKSVAF LEDPFWYKDA VIYQVHVKSF FDSNNDGIGD FPGLIAKLDY IADLGVNTIW 
LLPFYPSPRR DDGYDIAEYR GVHPDYGSLA DVRRLIAEAH RRGLRLITEL VINHTSDQHP 
WFQRARQARK GSAARNFYVW SDSDDKYRDT RIIFLDTEKS NWTWDPVAGQ YFWHRFYSHQ 
PDLNFDNPQV MKAVLGIMRY WLDLGVDGLR LDAIPYLIER DGTNNENLPE THQVLKRIRA 
ELDARYPDRM LLAEANQWPE DTQLYFGGAP EGKGDECHMA FHFPLMPRMY MAIAQEDRFP 
MTDILRQTPD IPSDCQWAIF LRNHDELTLE MVTDRERDYL WNFYAADRRA RINLGIRRRL 
APLLERDRRR IELLNSLLLS MPGTPVIYYG DEIGMGDNIY LGDRDGVRTP MQWSTDRNGG 
FSRADPAGLV LPPIMDPLYG FQSVNVEAQQ RDSYSLLNWT RRMLAVRKQQ KAFGRGSLRL 
LAPANRRIFA YLREYHGADG SSETILCVAN VSRSAQAVEL ELPQFADMVP VEMTGGSAFP 
PIGQLPYLLT LPPYGFCWFL LAPASQMPSW HIKPTEGMPE FQTLVLRRLD DLLVDPNRRI 
LEKEVLPAYL PKRRWFAGKG APSGNVHIAY TVTFGNLPRP VLLSEIEVGG EGGPQRYQLP 
LGFLPEEEFG SALPQQLAMT RVRRGRRVGL LTDAFTLEGF VRATVQALRE RRVLAFEQGE 
LRFLPTAQLD KVELPADAEV RYISAEQSNS SAVLGNALVL KLIRRVSVGV HPELEMGLHL 
TGYGFANIAS VLGEVCRVDA QGGCTVLMIL QRYLENQGDA WEWTQNTLDR AIRDELAGGE 
STLESQYSAL HELESFSRQL GQRLGEMHMA LAAPTEDPDF ARETAGPEQA AQWTESIGAQ 
LGRALEILAQ RQATLAEEER AAVEQLLLQR DALLEKVGEL AGACVGSLRI RVHGDLHLGQ 
VLVVQGDAYL IDFEGEPSRP LAARRAKHSP YKDVSGVLRS IGYAADMAMR NAQSVDSSEA 
ADQARRRIAS LYQANARQAF LAAYRQAAAE IGHAWAVPDG EEAALALFSL EKTAYEIAYE 
AENRPAWLAV PLRGLANLAQ QLLDGEAQ