| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_27870 |
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| Symbol | fliA |
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| ID | 7761692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 2866845 |
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| End bp | 2867540 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643805666 |
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| Product | motility sigma factor 28 |
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| Protein accession | YP_002799934 |
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| Protein GI | 226944861 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.736516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATACGG CACAGGGCAA AATCAGACAG CGGGACCTGC TCGAGGAATA TCTACCTCTG
GTGCGACGGC AGGCCTTGAA TCTGCAGACC AGGTTGCCGG CCAGCGTCGA GCTGGACGAC
CTGATCCAGG CCGGTACCAT CGGTCTGCTC GACGCCCTGT CACGCTACGA TGCCGCCCAG
GGCGCCAGTT TCGCCACCTT CGCCAGCCAG CGCGTGCGCG GCGCCATGCT CGACGAATTG
CGCAGCCGCG ACTGGGTGCC GCGCAGCGTG CGACGCAACG CCCGCGCCCT GGAGGATACC
CTGCGCCAGC TCGAGCAGCG CCTCGGCCGG CCCGCCGAAG AGCGCGAGAT CGCCACGTCC
ATGGGGCTGG ACCTCGCCGA ATACCGGCAG TTGCTGCTGG ACAGCAACGG CAGCCAACTG
GTGGCCATCG ACGACCTGGG CGAGGACGAG GTGGACGCGA TGAGCGTCGG ACACTACGCC
TCGCCTTTCG TCGAGCTTGC CGAAGGGCGC GATCTGGAGC GCTTGGTCAA GGCCATCGAG
GCGCTGCCCG AGCGGGAGAA ACTGGTGCTC GGCCTGTACT ACCAGGAAGA TCTCAACCTC
AAGGAAATCG GTGCCGTGCT GGGCGTCAGC GAATCCCGCG TCTGTCAGTT GCACAGCCAG
GCGGTCGCCC GTTTGCGCAA CGGCCTGGCG GAGTAG
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| Protein sequence | MYTAQGKIRQ RDLLEEYLPL VRRQALNLQT RLPASVELDD LIQAGTIGLL DALSRYDAAQ
GASFATFASQ RVRGAMLDEL RSRDWVPRSV RRNARALEDT LRQLEQRLGR PAEEREIATS
MGLDLAEYRQ LLLDSNGSQL VAIDDLGEDE VDAMSVGHYA SPFVELAEGR DLERLVKAIE
ALPEREKLVL GLYYQEDLNL KEIGAVLGVS ESRVCQLHSQ AVARLRNGLA E
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