| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_27700 |
|---|
| Symbol | fliC |
|---|
| ID | 7761675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 2847265 |
|---|
| End bp | 2848968 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643805649 |
|---|
| Product | Flagellin |
|---|
| Protein accession | YP_002799917 |
|---|
| Protein GI | 226944844 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTCA TCAATACCAA CATCACGTCG CTGATCGCTC AGAAGAACCT GAGTTCCTCG
CAGAGCGCCC TGACCACCGC CATGGAGCGC CTGTCTTCCG GCATGCGCAT CAACAGCGCC
AAGGACGACG CCGCCGGCCA GGCCATCGCC AACCGCATGA GCTCGCAGAT CACCGGCCTG
ACTCAAGCCC AGCGCAACGC CAACGACGGT ATTTCCGTCG CGCAGACCAC CGAAGGCGCG
CTGGACCAGA TCAACGACAA CCTACAGCGC ATCCGCGAAC TGACCGTACA GGCTCAGAAC
GGCACCAACT CCTCCGAAGA CCTGACCTCG ATCCAGAACG AAATCGCCCA GCGCCTGGAC
GAGATCGATC GTATCTCCCA GGAAACCGAG TTCAACGGCG TCAAGGTACT GTCGAAGGAT
ACCAACCTGA ACATCCAGGT CGGTGCCAAC GACGGCCAGT CCATCGGCAT CAGCCTCAAG
CAGATCAATG CCAAGACCCT GGGCCTGGAC GGCTTCAACG TCGATGGCAG CGGTGCCACC
CAGAACAGCA CCGCTACCGT AACCAGCCTG GAAGGCGCTG GTGCGGTCAA GAACTCGACG
ACGGGCAACT ATGTCCTCAC GACGACCTTC GACGAGGCCT CCCTGGAGCG CATGCTCGGC
GAAATGAAGG ATGGCGATGT CGTTACCGTC GGTTCTGGTG CCTCCACCGC AGTGGAATAT
ACTTTCAATA CCGCGAGCGG CAGCTTCACC TATACGGCCA ATGCCACCAA TGCCGCGGCG
TACGGGGATC TGGCAGACGA ACTTATCCCG CCCACCGGCA GCAGTATCAC CGGTACCTAT
GAATTTGCTG ATGGCAACGT GGCCACCTTC GCGGTGGATG CCAGCGGCAA GCTTACCCTC
GACGGCCAAG CCGCTTATGT CACTGCTACT GGCGAGTTGA CCAACAACGC CACCAGCGGT
GCGACCCAAG CTACCCTGGA GGATCTGTTT GCCACCGTTG GTGCCGGTGC CGCCGGTACC
GATACCTCCG CTAGAAGCCT CACTGTAGGC GGCGTCACCT ATACTGGTGC AGGCACTACA
GCAGGCCTGA GCTACACGGA CACCGCGACC TCCAGTGATG TACTGGCCGC ATCCGCATCC
ACTGTTGCCA GCATCGAGAT GCACAACGGC ATCACCAGTG CGACCATTGA CTTCGACAAC
ACTGGTGCCC AGAGCAGCAC GGGCACTCAG GTCTATGTCG ATGAAGACGG TCAGTTGACC
ACTGTCGGCT CTTACACGAC CACTTTCGCA GTCAATGCGG ATACCGGCGA AGTGACCGTC
GTCGACAATA GCGACACTGC CGGTGACTAT GCACTGGAAG AAGGCGCCAC CGTCTATGTA
GGCAGCAACG GCCGCCTGAC CACCAGTACC ACGAGCAAAG GTGATGTCAC CGAAGACCCG
CTGGCTGCTC TCGATGCCGC CCTGGCGAGT GTCGACGCCC TTCGCTCTGA CCTGGGTGCC
ATCCAAAACC GTTTCGACTC GGCCATCAAC AACCTGTCCA CCACCACCAC CAACCTGTCC
GCCGCCCGTT CGCGCATCGA AGATGCCGAC TACGCGGTGG AAGTGGCCAA CATGACCAAG
GCGCAGATCC TGCAACAAGC TGGCACTTCC GTCTTGGCCC AAGCCAACCA GGTTCCGCAA
TCGGTACTGT CGCTGCTGGG CTGA
|
|---|
| Protein sequence | MPVINTNITS LIAQKNLSSS QSALTTAMER LSSGMRINSA KDDAAGQAIA NRMSSQITGL
TQAQRNANDG ISVAQTTEGA LDQINDNLQR IRELTVQAQN GTNSSEDLTS IQNEIAQRLD
EIDRISQETE FNGVKVLSKD TNLNIQVGAN DGQSIGISLK QINAKTLGLD GFNVDGSGAT
QNSTATVTSL EGAGAVKNST TGNYVLTTTF DEASLERMLG EMKDGDVVTV GSGASTAVEY
TFNTASGSFT YTANATNAAA YGDLADELIP PTGSSITGTY EFADGNVATF AVDASGKLTL
DGQAAYVTAT GELTNNATSG ATQATLEDLF ATVGAGAAGT DTSARSLTVG GVTYTGAGTT
AGLSYTDTAT SSDVLAASAS TVASIEMHNG ITSATIDFDN TGAQSSTGTQ VYVDEDGQLT
TVGSYTTTFA VNADTGEVTV VDNSDTAGDY ALEEGATVYV GSNGRLTTST TSKGDVTEDP
LAALDAALAS VDALRSDLGA IQNRFDSAIN NLSTTTTNLS AARSRIEDAD YAVEVANMTK
AQILQQAGTS VLAQANQVPQ SVLSLLG
|
|---|
| |