| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_27640 |
|---|
| Symbol | motD |
|---|
| ID | 7764095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 2843124 |
|---|
| End bp | 2843951 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643805644 |
|---|
| Product | Flagellar motor protein |
|---|
| Protein accession | YP_002799912 |
|---|
| Protein GI | 226944839 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1360] Flagellar motor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000773379 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC CATTGGAGGG GGCATCCTCG GTTTCCGCCG GCTCGGCGCG CAAAGCACTG
CTGGAGCGTC AACGTCAACT GGAGCGAGAA CTGGCCCGGG CGCGGCAGGC GACGCGCGTG
GTCAAGCGCC AGGCTGCCAA TTCGGCCCAC GAGCCGGATA CGTCCGAAGG CGAGACGGAG
GGTTGGCTGG TGACCTATCT GGATATGATG ACCCTGCTGT TGGTGTTGCT GGTGGTGATG
CTGGCCTTCG CCGGTAGGGG GCAGGGGAAC GAAGAGCGAT CGCTCAGCCC GCTGTCCGAG
GGGGTTCTGC CGGCTGGCAG CGGTCTGCTC GAGCAGGCGG GCCGGTCTTT GCGCGACGAG
AAGGATGTGG ACTCCACGGG TGATCCTCTT CAAGGATTAC CGGTGGATCA GTTGGGCAAG
GATATCGAGG TGATCGTGAA GGAAGGCACG GTGAGCTTTC GTATCAGTAG CGAGATCCTC
TTCAGTTCCG CACAGGCCGA CCTGAGCCTG GACGGTTTAC GTGTATTGCA GCAGTTGGTC
CCGGTACTCA ATAGCAGTCG GCATGACATC GTGGTGGTGG GGCATACCGA TTCGCTGCCG
ATCCGCAGTA CGCGCTTTCC TTCCAATTGG GAACTTTCCG GGGCCAGGGC CGGCAGCGTG
GTGCGTTACC TGGAAGCGAA TGGCGTTGCA CGCCAGCGCA TGCGCGCGGT AGGCCTTGCC
GATACTCGAC CGCTACTCGA AAACTCCAGC CCTGAGGGAA GGGCCGGTAA CCGGCGGGTG
GAATTGATTC TGGAAACGCC ACAGGCGAAG GGGCAGTTAA AGGATTAG
|
|---|
| Protein sequence | MTEPLEGASS VSAGSARKAL LERQRQLERE LARARQATRV VKRQAANSAH EPDTSEGETE
GWLVTYLDMM TLLLVLLVVM LAFAGRGQGN EERSLSPLSE GVLPAGSGLL EQAGRSLRDE
KDVDSTGDPL QGLPVDQLGK DIEVIVKEGT VSFRISSEIL FSSAQADLSL DGLRVLQQLV
PVLNSSRHDI VVVGHTDSLP IRSTRFPSNW ELSGARAGSV VRYLEANGVA RQRMRAVGLA
DTRPLLENSS PEGRAGNRRV ELILETPQAK GQLKD
|
|---|
| |