| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_27540 |
|---|
| Symbol | |
|---|
| ID | 7764189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 2830799 |
|---|
| End bp | 2831659 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643805630 |
|---|
| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
|---|
| Protein accession | YP_002799903 |
|---|
| Protein GI | 226944830 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3344] Retron-type reverse transcriptase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCG CCTGGAAGCG CGTGAAGGCG AACAAGGGAG CCGCTGGGGT GGATGGGCTG
GACATAGACC AGACCGAATC CCATCTCAGG CAGGTATGGC CGAGTATCCG ACAGCAGCTG
CTGATGGGAA CCTACCAGCC ATTATCGGTA CGGCGCGTGT GCATACCGAA GCCAGACGGG
AGTGAGCGTG AGCTGGGCAT CCCCAGCGTG ACCGACCGTC TGATCCAGCA GGCCCTGCTA
CAAGTGCTGC AACCGCTGAT CGATCCCTCG TTCAGCGAGC ACAGCCACGG GTTCCGGCCT
GGTCGCCGGG CCTGGGACGC GGTTTTGTCT GCCCAGCGGT ACGCTCAGGA AGGCTACTGC
ATCGTGGTGG ACGTCGACCT GTCCCGGTTC TTCGACCGGG TCAACCACGA CATCCTGATC
GACCGACTGA GGAGGCAGGT GAACGACACC GGAGTGATCC GGCTGGTTCG GGCCTATCTG
AATGCGGGGA TCATGGATGG CGGTGTGGTG GTCGAACGAT TGGAAGGCAC GCCGCAAGGT
GGGCCGCTGT CGCCACTGCT GGCCAACGTG CTGCTCGATG CGGTGGACAA GGAGCTTGAG
CGCAGGGGAC ATCGCTTTGC CCGTTATGCC GACGACTGCA ACGTCTACGT TCGCAGCCAG
AAGGCGGGCG AGCGCGTGAT GGCCCTGCTC AAACGCTGCT ACGACAAGCT ACGCCTGAAG
ATCAACGAAT CGAAAAGCGC AGTGGCGGGC GTGTTTGGGC GCAGCTTCCT CGGCTACTGC
TTGTGGCAAA ACCGCGATGG CGAGGTGCGC CGTGGCGTAT CGAAGAAAGC GCTGGAGGCG
TTCAAGCAAC GGATCAGGTA G
|
|---|
| Protein sequence | MQRAWKRVKA NKGAAGVDGL DIDQTESHLR QVWPSIRQQL LMGTYQPLSV RRVCIPKPDG
SERELGIPSV TDRLIQQALL QVLQPLIDPS FSEHSHGFRP GRRAWDAVLS AQRYAQEGYC
IVVDVDLSRF FDRVNHDILI DRLRRQVNDT GVIRLVRAYL NAGIMDGGVV VERLEGTPQG
GPLSPLLANV LLDAVDKELE RRGHRFARYA DDCNVYVRSQ KAGERVMALL KRCYDKLRLK
INESKSAVAG VFGRSFLGYC LWQNRDGEVR RGVSKKALEA FKQRIR
|
|---|
| |