Gene Avin_27350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_27350 
Symbol 
ID7761642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2809744 
End bp2810433 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content71% 
IMG OID643805611 
ProductHAD-superfamily hydrolase 
Protein accessionYP_002799884 
Protein GI226944811 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTACG CGATCTTCGA CATGGACGGC CTGCTGATCG ATTCGGAACC GCTGTGGATG 
TCGACCCAGG CCGCGCTGTT GCACGAGCTG TACGGGATCG CGCCCGGCAC GCAGGACCTG
CACGCCTGGA AAGGCGTCAG CAGCCGGGCC TTCTGCGAGG ACATGGCCCG CCTGCATGCC
GGACGGGGCG TCGAGGCCGG AACGCTGTTC GAGGCGCTGA TCGCGCGCAT GGGACGGGCG
ATCGTCGAGG CGCCGCTGAT GCCGGGCGCC GTCGAACTCA TCGCCTGGCT GCGCGAGCGG
CACGTCGGGC TGGCGATCGC GTCCTCCTCG CCGCTGCCCT TCATCGCGGC GGTGGTGCGC
CGGCACGCGC TGCCGATCGC CGTGTTCGCC TCCGGCACCG AGGTGCCGCG TTCCAAGCCG
CATCCGGCGG TCTTCGAACT GGCGGCCGAG CGCCTGGGCG CGCAGCGGCA CCAGTGCCGG
GTCTGGGAAG ACTCGCTCAA CGGCGTGATC GCCGCCAGGG CCGCCGGCAT GCCGGTGGTG
GCGGTGCCGG ACCCGGCCCA TCCCGGCGCG GAGCGCTTCG CCATCGCCGA CCGGGTCCAT
CGCACGCTGC ACGAAAGCCT GGCCGAGCTG AACGCCGCGG ACCCAGGAAC ACCAACCATC
AAGAGCCCGA ATCATGTCCA ACCTGCTTGA
 
Protein sequence
MQYAIFDMDG LLIDSEPLWM STQAALLHEL YGIAPGTQDL HAWKGVSSRA FCEDMARLHA 
GRGVEAGTLF EALIARMGRA IVEAPLMPGA VELIAWLRER HVGLAIASSS PLPFIAAVVR
RHALPIAVFA SGTEVPRSKP HPAVFELAAE RLGAQRHQCR VWEDSLNGVI AARAAGMPVV
AVPDPAHPGA ERFAIADRVH RTLHESLAEL NAADPGTPTI KSPNHVQPA