Gene Avin_27270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_27270 
SymbolhexR-1 
ID7761634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2800401 
End bp2801270 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content67% 
IMG OID643805603 
ProductDNA-binding transcriptional regulator HexR 
Protein accessionYP_002799876 
Protein GI226944803 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGCA CGCGCAATCT GCTGGAACAG ATCCAGAGCC GCCTAGAAGA CCTGAACAAG 
GCCGAGCGCA AGGTCGCCGA AGTCATCTTG CAGGACCCGC AGCAAGCCAC CCGCTACAGC
ATCGCCTCGC TCGCCCAGGC CGCCCAGGTC AGCGAGCCGA CCGTCAATCG CTTTTGCCGC
TCCTTCGGGG TCAGCGGCTA CCCGGAGCTG AAACTGCAAC TGGCGCAGAG CCTGGCCAGC
GGCGCCGCCT ACGTGAGCCG CGCCGTGGAG GCCGACGATG GCCCCGAGGC CTACACCCGC
AAGATCTTCG GCAGCACCAT CGCCTCGCTG GACAGCGCCT GCCAGACGCT CGACCCCCAG
GCCATCGACA GGGCGGTCGA CCTGCTGATC CAGGCCCGGC AAATCCATTT CTTCGGCCTC
GGCGCCTCGG CCTCGGTGGC CCAGGACGCC CAGCACAAGT TCTTCCGCTT CAACCTCGCC
GTGTCGGCGC AGTGCGACGT GCTGATGCAG CGCATGCTCG CCTCGGTGGC CCACACCGGC
GACCTTTTCG TGATCATTTC CTACACCGGG CGCACCCGCG AGCTGGTCGA GGTGGCGCAC
CTGGCCCGCG AGAACGGCGC CTCGGTGCTC GGCCTGACCG CCGCCGGCTC GCCGCTGGCC
AGGGCCTGTA CCCTGAGCCT GAACATCCCG CTGCCGGAAG ACACCGACAT CTACATGCCG
ATGACTTCGC GGATCATCCA GCTCACCGTG CTCGACGTAC TGGCCACCGG CATGACCCTG
CGCCGCGGCA TCGACTTCCA GCCGCATCTG CGCAAGATCA AGGAAAGCCT CAACAGCACG
CGCTATCCAA GCGACGACGA ACTCCTCTAG
 
Protein sequence
MDRTRNLLEQ IQSRLEDLNK AERKVAEVIL QDPQQATRYS IASLAQAAQV SEPTVNRFCR 
SFGVSGYPEL KLQLAQSLAS GAAYVSRAVE ADDGPEAYTR KIFGSTIASL DSACQTLDPQ
AIDRAVDLLI QARQIHFFGL GASASVAQDA QHKFFRFNLA VSAQCDVLMQ RMLASVAHTG
DLFVIISYTG RTRELVEVAH LARENGASVL GLTAAGSPLA RACTLSLNIP LPEDTDIYMP
MTSRIIQLTV LDVLATGMTL RRGIDFQPHL RKIKESLNST RYPSDDELL