| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_26710 |
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| Symbol | |
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| ID | 7761579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 2736912 |
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| End bp | 2740529 |
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| Gene Length | 3618 bp |
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| Protein Length | 1205 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643805549 |
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| Product | hypothetical protein |
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| Protein accession | YP_002799822 |
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| Protein GI | 226944749 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0957907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGCC TGCTGGACTT CCTGGCGCGC GCGCTCGGCC TGATCCTCGG CCGGCAGTTG
TGGGTCCTGC TGGGGCTGGC GGCGCTCGTC GCGCTGATCT GGCTGGTCGG GCCGCTGATC
GCCATCGACG GCTACCGGCC GCTGCAGAGC GACCGGCTAC GCCTGGGACT GATCGCGGCG
ATGCTGATGG CCTGGCTGAT GCGCGTGCTG TATCGCACCT GGCGCTCGGC GAACCTGAAC
GCGCAACTGC TCAACCGGGT GCGCGAGCCG GCGGAGGGCG CCGCGACGAC GGCCGATCCG
CACCTGGAGG AATTGCGCAG CCGCTTCGGC GAGGCCGCGG AACGGCTCAA GGGCGCCCGC
TTCGCCGCGC AGGGCGGCAG CGGCTGGGGG CGCTGGCTGG AGCGCATCTC GCGGCAATAC
CTGTATCAAC TGCCCTGGTA CCTGTTCATC GGCGCGCCGG GATCGGGCAA GACCACGGCC
CTGGTCAACT CCGGGCTGGA TTTCCCGCTC GCCGACCAGT TCGGCAAGGC CGCGATCCGT
GGCGTCGGCG GCACCCGCAA TTGCGACTGG TGGTTCACCA ACGAGGCGGT GTTGATCGAC
ACCGCCGGTC GCTACACCCT GCAGGAAAGC CATCGCGAGC AGGACCAGAA GGAATGGCTG
GGCTTCGTCG AGCTGTTGAA GAAGTACCGC GCGCGCCAGC CGATCAACGG CGTGATGCTC
ACCGTCAGCA CCGCCGACCT GCTCAGCAGC GACGAACAGG AGCGCACGCA GCACGCCGTC
CGACTGCGCC AGCGGCTGCA GGAGCTGCGC GCCCAACTGG GCATCCAGTT CCCGGTCTAT
GTGCTGGTGA CCAAGATCGA CCTGCTGTCC GGGTTCACCG AATATTTCGC CCGCTTCGGC
CGCGAGGAGC GCAGTCAGGT CTGGGGCATG ACCTTCCCGC TGGAGGCGGT GCGCGCGCCG
GACTTCGACC TGCGGCGGGC CTTCGCCGAC GAGTACCGGC TGCTGCTGGA GCGCCTGTAC
GCCGGTCTGC CCGAGCGCCT GCAGGGCGAG CAGGACCCTC TCCAGCGCGA GCTGGCCTAC
CTGCTGCCCC AGGAGTTCGC CGGGCTGCAG GCGGTGCTGG AGCGCTTCCT GGAGCAGGTG
TTCGTCGAGT CCCGCTTCGA GGCCAATGCG CTGCCGCGCG GCGTGTATTT CACCAGCGGC
ACCCAGGAAG GCACGGTGTT CGACCGGGTG ATGGGCGGCA TCAAGCGCCT GCTGCAGCTC
GGCGGCGGCG CGCATCTGCC ACAGGTCGGC GAGCCGGGGC GGAGTTTCTT CCTGCGCCGG
CTGATGCAGG AAGTGATCTT CCAGGAAGCC GCCCTGGCCG GGCGCAACGA GCGCTGGCAG
CGCCGCCAGG CCTGGCTGCG TCGCGCCGGC CACGCGCTGG TGGGCGTCGG CGTGCTGGCG
CTGGGACTGG CCTGGTTCAA CAGCTATCGC CACAACCTGC GCCATGTCGA GGAGGTGCTG
GCCAGGGTGC CGGCGGTGGC GGAGCGGATC GCCGGGATCA AGGTGGACGA CCGGGCGCCG
GTCGGCGCCC TGATGCCGGT GCTCGACCAA CTGGCTTCGC TGCACGCCAG CAGCCGCTTC
GACGTCGACG ACCCGCCGCT GGATCACCGT TTCGGCCTGT TCCAGGGCGA CAAGCTGCGC
GCCGCGGCCG ACGGCGCCTA TGCCCGCGCG CTGGAGGACG TGCTGCTGCC GCACCTGGCG
CGCCGCCTGG AGGACGGCCT GCGCCAGGCG CGGCCCGACG ATGTGGAGTA CGCCTACGGC
GCGCTGAAGG CCTACCTGAT GCTGTACGAG GCGCAGCATT ACGACGCCGA TTACCTGCAG
GCCTGGCTGT CGTTCGACAT CGAGCGCGGC CTGGACGGGC GGCTCGCCAA CGACCGGCGG
GAGGCGCTGC GCCAGCATCT GGCGCGGCTG CTGGGCGGTC GCGCGGTCAG CTCGCCCTAT
GCCCGCGACG ACGCGCTGGT CGCCCAGGTC CGCGGTCGCC TGCTCGGGCA TGGCTTCGGC
GAGCGCAGCT ACGGCAGCCT GAAGCGCGCG CTGCGCCACG ACGAACGCCT GACGGATTTC
AACGTGGCCG AAGTCGTCGG CCCGCAGGCC ACCCTGGTGT TCCTGCGGGT CAGCGGCGCC
AGCCTGGGCA ACGGCGGCGT GCCGGGACTC TTCACCTATC GCGGTTACTG GGAAGTGTTC
GCCCCGCGCA TCGAAGACGA CCTCGTCGCC CGTTCCCGCG AGGAGAGCTG GGTGCTGGGC
CTGCCGGAGC TGGAACGCAT CGATCCGCAG ACCCTGGCCA AGTGGGTCCG CGAGGTCAAG
CGGCTGTATT TCGACGACTA CATCCGCGAA TGGGAAGGCT ACCTGGCCGA CCTGCGCCTG
CGCAGCGGCG CCGACCTGGC GCAGAACATC CAGATCGCCC GCGCCCTGTC GGCGGCCGAC
TCGCCGCTGG TGAAACTGAT GAGTGCCGCA GCGCAGGAGA CCACCCTGCT GCGCGCGGGC
GAAGACGACC GGCGTCCGGC GGCCGAGCAG GCCAGGGACC GGGTCGGCGC CGCGCGCGAG
GCGCTGGAAA GCCTGTTCGG CCGGCCCGAA TCGAGCGCGG ACCCACGCCC GTCCGCCACC
GAGCGTCCCG AACGGGTGGT GGACGAGCGC TTCGCCGCGC TGCGTCACTT CACCCGGCCC
GGCGAGAAGG GCGAGCCGGC GCCGATCCAG AGCGTGCGCG ACACCCTGAA CGAGCTGTAC
ATCCATCTGA TCGCCACCGA CACGGCCCTG CGCGACGGCC AGACGCCGCC CGGTGACGGG
GTGCTGAACA AGGTCCGCGC GGACGCCGGC CGGTTGCCGC TGCCGTTTCG CAACATGCTC
AACGAACTCG CCCGGGTATC CGACGGCAAC GTCAGCCGCG TGGTGCACCG GCAGCTCGGC
CAGAACGTCG CGGCGAACGT CGGCGACTTC TGCCGGCAGG CGGTCGACGG CCGCTATCCG
CTGGCGCACG GCTCGGCGCG CGACATCAGC CCGAACGATT TCGCGCAGCT CTTCGCGCCG
GCCGGGCTGA TGGACGAGTT CTTCCAGAAA AACCTCGCCG GCCTGGTGGA TACCTCGGTG
CGGCCCTGGC GCTTCAAGGG CGAGGCCGGC GGCCGGGCCG CCTACCTGCA ATCCTTCGAG
CGCGCGGCGG TGATCCGCGA CGTGTATTTC GCCGGCGGCG GGCGCACCCC GTCGATCCGC
ATCGAACTCA AGCCGCTGCG CATGGACGCC GGCATCGCGC AGATCCTCTT CGATATCGAT
GGCCAGACCC TGCGCTACGC CCACGGGCCG CAGGTACCGG TCCAGGTCCA GTGGCCCGGT
CCGGGCGGCG GCAACCGGGT GCGGCTGGAG GCCAGCGGGC CGGACGGTAC CAGCAAGGTC
CTGCTCAGCG AAGGACCCTG GGCGCTGCAC CGGCTGTTCG ACCGGGCCGC CCTGGCGCCC
GGCGGGGCGC CGGAGCAGAT GATCGCCACC TTCGACATCG GTGGCGCCAA GGCGGTGTTT
CAGGTGACCG CCGGCGGCGT GCGCAACCCT TTCCGGCTGG CGCAACTGGA ATCCTTCTCC
TGTCCGAGGC GCTCATGA
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| Protein sequence | MNRLLDFLAR ALGLILGRQL WVLLGLAALV ALIWLVGPLI AIDGYRPLQS DRLRLGLIAA
MLMAWLMRVL YRTWRSANLN AQLLNRVREP AEGAATTADP HLEELRSRFG EAAERLKGAR
FAAQGGSGWG RWLERISRQY LYQLPWYLFI GAPGSGKTTA LVNSGLDFPL ADQFGKAAIR
GVGGTRNCDW WFTNEAVLID TAGRYTLQES HREQDQKEWL GFVELLKKYR ARQPINGVML
TVSTADLLSS DEQERTQHAV RLRQRLQELR AQLGIQFPVY VLVTKIDLLS GFTEYFARFG
REERSQVWGM TFPLEAVRAP DFDLRRAFAD EYRLLLERLY AGLPERLQGE QDPLQRELAY
LLPQEFAGLQ AVLERFLEQV FVESRFEANA LPRGVYFTSG TQEGTVFDRV MGGIKRLLQL
GGGAHLPQVG EPGRSFFLRR LMQEVIFQEA ALAGRNERWQ RRQAWLRRAG HALVGVGVLA
LGLAWFNSYR HNLRHVEEVL ARVPAVAERI AGIKVDDRAP VGALMPVLDQ LASLHASSRF
DVDDPPLDHR FGLFQGDKLR AAADGAYARA LEDVLLPHLA RRLEDGLRQA RPDDVEYAYG
ALKAYLMLYE AQHYDADYLQ AWLSFDIERG LDGRLANDRR EALRQHLARL LGGRAVSSPY
ARDDALVAQV RGRLLGHGFG ERSYGSLKRA LRHDERLTDF NVAEVVGPQA TLVFLRVSGA
SLGNGGVPGL FTYRGYWEVF APRIEDDLVA RSREESWVLG LPELERIDPQ TLAKWVREVK
RLYFDDYIRE WEGYLADLRL RSGADLAQNI QIARALSAAD SPLVKLMSAA AQETTLLRAG
EDDRRPAAEQ ARDRVGAARE ALESLFGRPE SSADPRPSAT ERPERVVDER FAALRHFTRP
GEKGEPAPIQ SVRDTLNELY IHLIATDTAL RDGQTPPGDG VLNKVRADAG RLPLPFRNML
NELARVSDGN VSRVVHRQLG QNVAANVGDF CRQAVDGRYP LAHGSARDIS PNDFAQLFAP
AGLMDEFFQK NLAGLVDTSV RPWRFKGEAG GRAAYLQSFE RAAVIRDVYF AGGGRTPSIR
IELKPLRMDA GIAQILFDID GQTLRYAHGP QVPVQVQWPG PGGGNRVRLE ASGPDGTSKV
LLSEGPWALH RLFDRAALAP GGAPEQMIAT FDIGGAKAVF QVTAGGVRNP FRLAQLESFS
CPRRS
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