Gene Avin_26660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_26660 
Symbol 
ID7761574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2731238 
End bp2732740 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content64% 
IMG OID643805544 
Producthypothetical protein 
Protein accessionYP_002799817 
Protein GI226944744 
COG category[S] Function unknown 
COG ID[COG3517] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03355] type VI secretion protein, EvpB/VC_A0108 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.930343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGA TCGATGGCGC CCTCGTACCG GGCGCGCAGC TTGCCGAATA CGACGAAAGC 
GAATTCGCCG CGCTGTTGCA GAAGGAGTTC CGGCCCAAGA CGGAACAGGC GCGCAGCGTG
GTGGAGGACG CCGTGCGCAC GCTGGCCCGG CAGGCGCTGG AGCAGAGCGT CGGCCTGTCC
GGCGACGCCT ACAACAGCAT CCAGTCCATC ATCGCGGAAA TCGACCGCAA GCTGACCGAA
CAGGTGAACC TGATCCTGCA CCACGCCGAC TTCCAGCAAC TGGAAGGCAG TTGGCGCGGC
CTGCATCACC TGGTCAACAA CACCGAAACC GACGAGATGC TGAAGATCCG CGTGCTGCCG
ATCTCCAAGA AGGAGCTGGC GCGCAATCTC AAGCGGCACA AAGGCGTGGG CTGGGACCAG
AGCCCGCTGT TCAAGAAGAT CTACGAAGAG GAATACGGCC AGTTCGGCGG CGAGCCCTAC
GGCTGCCTGA TCGGCGATTT CCATTTCGAC CACAGCCCGC CGGACGTGGA AACCCTGAGC
GAGCTGGCAC GCATCGCCGC CGCCGCGCAC TGCCCGGTGA TCACCGCGGC AGCGCCATCG
GTCATGCAGA TGGAAACCTG GCAGGAACTG GCCAACCCGC GCGACCTGAG CAAGATCTTC
CAGAACAGCG AATACGCCGC CTGGCGCGCC CTGCGCGAGT CGGAGGACTC GCGCTACCTG
GCGCTGACCA TGCCGCGCTT CCTGGCCCGC ACGCCCTACG GCAGTCGCAC CAACCCGGTG
GACGCGTTCG ATTTCGAGGA AGACACCGAC AGCACCAACC ACGACCGCTA CGCCTGGGCC
AACTCGGCCT ACGCGATGGG CGTGAACATC AACCGCTCGT TCAAGCTCTA CGGCTGGTGT
ACCTCGATCC GCGGCGTGGA AAGCGGCGGG GCGGTGGAAA ACCTGCCGTA CCACAGTTTT
CCCACCGACG ACGGCGGGGT GGACATGAAA TGTCCCACCG AGATCGCCAT CAGCGACCGC
CGCGAGGCGG AACTGGCCAA GAACGGTTTC ATGCCGCTGG TCCACCGCAA GAACACCAAC
GTCGCCGCTT TCATCGGCGC CCAGTCGCTG CAGAAACCCG CCGAATACAT GGATGCCGAC
GCCACCACCA ACGCCCGGCT GTCGGCGCGC CTGCCCTATC TGTTCGCCTG CTGCCGCTTC
GCGCATTACC TCAAGTGCAT CGTGCGCGAC AAGATCGGTT CCTTCCAGGA GCGCGGCGAC
ATCGAGCGCT GGCTCAACAA ATGGATCATG ACCTATGTGG ACGGCGATCC GCTCAATTCC
TCGCAACTGA CCAAGGCCAG GAAGCCCCTG GCCGCCGCCG AGGTGCGCGT CGAGGAGCAG
CCGGACAACC CGGGCTACTA CGCGGCCAAG TTCTTCCTGC GTCCCCACTA CCAGCTCGAA
GGGTTGACCG TGTCCCTGCG GCTGGTCTCG AAACTGCCGT CGGTGAAGGG CAGCGAAGCC
TGA
 
Protein sequence
MKQIDGALVP GAQLAEYDES EFAALLQKEF RPKTEQARSV VEDAVRTLAR QALEQSVGLS 
GDAYNSIQSI IAEIDRKLTE QVNLILHHAD FQQLEGSWRG LHHLVNNTET DEMLKIRVLP
ISKKELARNL KRHKGVGWDQ SPLFKKIYEE EYGQFGGEPY GCLIGDFHFD HSPPDVETLS
ELARIAAAAH CPVITAAAPS VMQMETWQEL ANPRDLSKIF QNSEYAAWRA LRESEDSRYL
ALTMPRFLAR TPYGSRTNPV DAFDFEEDTD STNHDRYAWA NSAYAMGVNI NRSFKLYGWC
TSIRGVESGG AVENLPYHSF PTDDGGVDMK CPTEIAISDR REAELAKNGF MPLVHRKNTN
VAAFIGAQSL QKPAEYMDAD ATTNARLSAR LPYLFACCRF AHYLKCIVRD KIGSFQERGD
IERWLNKWIM TYVDGDPLNS SQLTKARKPL AAAEVRVEEQ PDNPGYYAAK FFLRPHYQLE
GLTVSLRLVS KLPSVKGSEA