| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_26490 |
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| Symbol | nifA2 |
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| ID | 7761557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 2708003 |
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| End bp | 2709460 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643805527 |
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| Product | sigma54-dependent activator protein |
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| Protein accession | YP_002799800 |
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| Protein GI | 226944727 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.593646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGCGCCGGA CCCGACAGGC CAAGGAGGCA GTGGCGCAGG TATTGGCCAT ATTGCATGAC
TACCTGGGAT TGCTGCACGG CCTGGTATCC ATCATTGCCG CCCCGCAGCC CCGCATGCTG
CGGGTCGTCG CCATCCATAC GAGTTCCAGG CTGGTAGCCA AGGCTGCCGA GGAGGTCCGC
TATCGGCGCG GTGAGGGCGT CATGGGCCAT GTGCTCGAGC ACAGCGAAAG CGTCATGCTC
GAACGCGTTT CCCTGGCTCC CCGTTTTCTC GACCGGCTGG CGCTCTACGA TCCCGAGTCG
CCCTTCATCG CCGTGCCGAT CAAGGGGCCC GAAGACGACA CCATCGGTGT TCTAGCGGCC
CAGCCCGATG GGCGGAAGGA CGTATCGCTG CCGGAACGCG CCCATTTTCT CGAAATCGTC
GCCAACCTGC TGTCGCAGAC GGTTCATCTC ATGGCGAAAC TCACGGGCAG CCGCTGCACG
ACGAGCGAGC GCGACGAACC TCGCGGCAAT GTGCGAACCC AACATGGCAT CGAAAACATG
ATGATAGGCA GCACCCCCTC CATGCGTCGG GTATTCGAGC AGATCAGACA GGTGGCCAGA
TGGGACAGCA CCGTCCTGGT TCTCGGCGAA TCCGGTACGG GCAAGGAACT GATCGCCAGC
GCCATTCATT GCAACTCGCC ACGCGCGCGT TGTCCGCTGG TCCGCCTGAA CTGTTCCTCC
CTGCCCGAGA CGCTGCTGGA GTCGGAACTC TTCGGCCATG AGAAGGGCGC CTTCACCGGT
GCGGTCAAGC AGCGCAAAGG GCGTTTCGAG CAGGCCGATG GCGGTACCCT GTTCCTCGAC
GAGATCGGCG AAATTTCACC CACGTTCCAG GCCAAGCTCC TGCGGGTGCT CCAGGAGGGG
GAGTTCGAGC GGGTCGGCGG CAACCAGACG GTGAGGGTGA ACGTACGCAT CGTGGCCGCG
ACCAACCGCG ATCTGGAAAG CGAGGTGAAA AAGGGCAATT TCCGCGAGGA TCTCTACTAT
CGCCTGAACG TCATGCCCAT TCAGGCTCCG CCGCTTCGCG AGCGCCTTGC CGACATTCCC
GAACTGGCCA GATTCCTGCT CGACAAGCTG TCGTCCCAGC AGGGGCGATC CCTGGACATA
ACCGATTGCG CCATCGAGGT GCTGAAGAAG CACCACTGGC CGGGCAACGT GCGCGAGCTG
GAAAATTGCC TGGAGCGCTC GTCGATCATG AGTGAAAACG GCGTCATCAC GCGCAACGTG
CTTTCCCTGG CCGGCCTGGA TGACGGAGGT TCTCCATCGC TGGCCGATGA TGGAACCCTG
GACGATCGCG AACGGCTGAT CGCCGCCCTG GAACAGGCGG GATGGGTCAA GGCGAAGGCG
GCCCGCCTGT TGGGGATGAC GCCCAGGCAG GTCGCCTACC GGATTCAGAC CCTGAATATC
TGCATGCAGA AGATCTGA
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| Protein sequence | MRRTRQAKEA VAQVLAILHD YLGLLHGLVS IIAAPQPRML RVVAIHTSSR LVAKAAEEVR
YRRGEGVMGH VLEHSESVML ERVSLAPRFL DRLALYDPES PFIAVPIKGP EDDTIGVLAA
QPDGRKDVSL PERAHFLEIV ANLLSQTVHL MAKLTGSRCT TSERDEPRGN VRTQHGIENM
MIGSTPSMRR VFEQIRQVAR WDSTVLVLGE SGTGKELIAS AIHCNSPRAR CPLVRLNCSS
LPETLLESEL FGHEKGAFTG AVKQRKGRFE QADGGTLFLD EIGEISPTFQ AKLLRVLQEG
EFERVGGNQT VRVNVRIVAA TNRDLESEVK KGNFREDLYY RLNVMPIQAP PLRERLADIP
ELARFLLDKL SSQQGRSLDI TDCAIEVLKK HHWPGNVREL ENCLERSSIM SENGVITRNV
LSLAGLDDGG SPSLADDGTL DDRERLIAAL EQAGWVKAKA ARLLGMTPRQ VAYRIQTLNI
CMQKI
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