| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_26340 |
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| Symbol | |
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| ID | 7761542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 2690546 |
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| End bp | 2693860 |
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| Gene Length | 3315 bp |
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| Protein Length | 1104 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643805512 |
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| Product | cyclic di-GMP signal transduction protein |
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| Protein accession | YP_002799785 |
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| Protein GI | 226944712 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.495435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATGCA ACCCAGACAT CGAAGGCATC ATCCATGCGC AGGACGTTCG GGAACGGCTG
GCGCCTTCGT TCACCCGAGC CCTGGTCTCC AATGTCGCCG TTCTGGTCGT CGCGCTCGGA
CTGGCCTTGC TAGTCGCGAT GGCCTGGCAG GGCACCGCCA GTAGCGAGGA GGCGGCACGA
CAGGAAATCG CCGAAACGCT CAACCGGACG CTGGGACGTT TGCGGATTCT GGTCCGTGCC
GCCGAGATGA CGGCGGAATC GGCCGAACGC GGTGTACGTA CGCTCGGTGC GAGCGGGGCC
ATGCTGCGCC CGACCCTGGA AAATTCGCTG GCCGCGTTCG AACAGCGCCC GGAACTGAGT
TATCTCGGCA TCGTCCAGCC CGAGACGGGC GAATACGGGA ACCTGGAGCG GACCGCCACG
GGAGAGATCC TCCTCTGGCT GTTTCCCGGA AATCGCCCCA CCGACCCGGC CGTACGCAAT
TTCATCCTGA CCGACGAAGG CTTCGTCCCC CATCGGACCT ACCCCGCCAA CGGCTATGAC
CCGCGCCGCC GACCGTTCTA CCAGGCGGCG TCGAACGGCC CGGCCGAGGG CACCTGGATG
CCGGCATATC GGTGGATCGT CCATTTCTCG GACGACAGCG AGCCGCCTCT CTGGGGACTC
AGTTACGCGA AGGCGCTTCG TGACGAGGCC GGCAAGTTGG TGAGCGTACT CGATACCGAC
TTCGACATAC CGGCCCTGAA CGGTTTCCTG AAATCCCTCG CCACGGAATA TCACTCCCGG
CTCCATGTCG TGGAACTGGG GGCGACGCCC CGCCTGATCG GCGGTCCCGA TGTCGGCCGG
GAGCCGCTTC CACTTCCCGC GGAACTCGCT TCGCTGAGCG GATTTTCCGG CGATGCTTTC
GTCGATCGGA TGGAGCTGGA AGGCGAGCAG CGATGGGTCG GTGCGCGGCG CCTGGATCTC
AAGGGCGGCA TTTCGTGGCT GGTCGTCGCC TCGCGCACGG CGCCCTTCAT CGAGGCCCCG
CTGCGTCACC AGTTGTTCCA GGTGCTGGGC ATGGGTCTGG CGATCGCGCT GGGCCTGGTG
CTGGTTTCGG TCCGCACCGC CCGCCGTTTC GGCAGGCCGC TCGCCGAACT GGAGCGGCGT
GTCACCGGCA TCGGGCTGCA TGACTTGAAC GCCTCGGCGA CGAGCCCCCT GTCCTCCGCG
GACGACTTTC GGGAAACCCA GCTCCTGGGC AAGGCCCTCG ACCGCATGGC CGCGGCCGTC
CGGCAGCAGG TCCGGGCCAA GGAGCAGCAA GTGGCCTCGC TCGCCCTGAA AGGGGCCCTT
TTCGATTTTT CCTCCGCGGC GATCTTCAGC CTCGACCGCC AACTGAAGGT CATCGAATGG
AATGCCGCCG CGGAACGCCT GTTCGGCCAG GAGCGGGACG GGGTGCTCGG CCGGGCCGCT
GGCGAAGTGG TGACGGCTCC GAACGGGCCC GCCGACTGGG CGGCGATCCT GGGCTCGACG
GCTACCGGCA CGTTCCAATT CCTCGGCGCG CATGGCCCGT TCGACGCGGA ACTGCGATTC
GTGACCTTCA CGCAGGAAGA GCGCGAGATC CACACCTTCG TTCTCAACGA TATCTCGGAA
CGCAAACACA CCGAGCGGCA GTTGCGGCAG GAGCGCGACT ACGCCGACGC GGTGCTCAAC
AGCCTGCCGG GCGTCTTCTA TCACTACGAC GAAAACGTGC GCCTGAGGCG CTGGAACAGG
AACCTCGAAC GGATCACCGG CTATAAATCC GAAGAACTCG CGGGAGTCGA GCCGACGATC
TTTTTCGCCG ACGAGGACAA GGCGCTGGTC GCGAGCCGGA TCGGCGAAGT CTTCGAGAAG
GGAGAATCCT CGGTCGAGGC GGATTACCTG CTCAAGGATG GCCAACGGAT TCCCTACCTG
TTCACCGGCG TGCGCTTCGA GTACGACGGT CGGCGCGGTT TCGTCGGCGT CGGCTACGAC
ATCAGCGAAC GCAAGCGCGC CGAACAGCGT ATCCGCCACC TCGCTATGCA CGACGGCCTC
ACCGACCTGC CGAACCGCAA CCTGATCCAG GAGCGCATCG AACAGGCGAT CGTCCGGGCG
CGCCGTGGCG GCCGCCTGCT CGCATTGCTC TATCTCGACC TGGATCGCTT CAAGGTTCTC
AACGACGGCT ACGGCCATTT GTTCGGCGAC GCCGTACTGA AGACCGCCAG CGAACGGCTG
CTCAAGCTGG TGCGCGAAGG CGATACCGTG GCCCGCCTCG GCGGCGACGA GTTCCTGATC
CTGCTGGCCG ACCTGGAGCA GCCGGCCGAC GCCGATGCCG TCGCCCGCAA GATCGTCGGG
AGCCTCGATT GCCCGATCGT CGTGCAGGAG CGAAAAATCC ACCTGTCCGG CAGTATCGGC
GTGAGCCTGT TCCCCCGCGA CGGCGAAACC GCCGACGAGC TGATCGACAA CGCCGACATG
GCGATGTACC GGGCCAAGGA ACTGGGCCGC AACACCTACC AGTTCTTCAC GCGCGCCATG
AGCCTGGAGA CGCAGCGCCG CGTCGACCTG GAAATCAAGC TGCGCGGCGC GGCGACGGCA
GGACAACTGC AACTCGTCTA CCAGCCCAAG GTGAGCCTGG AAAATGGCGG CATCAGCGGC
TGCGAGGCGC TGCTGCGCTG GCATCATCCC GAGCTGGGCA TCGTATCTCC CGAGCACTTC
ATTCCGATCG CGGAGGACTC CGGCCTGATC GTGCCGATCG GCGACTGGGT GCTGCGCACC
GCCTGCATGC AAGCCAGGGC CTGGATGGAT GCCGGCTTGC CGCCCGTCTG CGTTGCGGTG
AACGTCTCCA CGCGCCAGTT CCTGCAGCAG GATGTGGTCG CCTGGGTGAC GCGCACGCTC
CGGGAGACAG GCCTGCCAGC CGCCCGGCTG GAACTCGAAC TCACCGAAAG CCTGATCGCC
CGGGATATCG AGAAGGTGAC CGCGACCATC GACCAGCTCA AGGACATCGG CGTGAAACTG
TCCATCGACG ATTTCGGCAC CGGCTATTCG AGCCTCAACT ACCTGAAACG CTTCCGCGTC
GATACGCTGA AAATCGATCA GTCCTTCGTG CGTAACATGC TGACCGAAAT GGAGGACGAG
ACCATCGTGC TGGCGGTCAT CGCCCTCGCC CACAACCTCA AGTTCAAGGT GATCGCCGAG
GGCGTGGAAA CCGAACAGCA CAGCCGTTTC CTGTGTTCGA ACGGCTGCGA CGAGATCCAG
GGCCATTATT TCAGCGAACC CGTGACGGCC GAGGCGTTCG AGACGATGCT GCGCGCCGGC
AAGCACTTGT CCTGA
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| Protein sequence | MACNPDIEGI IHAQDVRERL APSFTRALVS NVAVLVVALG LALLVAMAWQ GTASSEEAAR
QEIAETLNRT LGRLRILVRA AEMTAESAER GVRTLGASGA MLRPTLENSL AAFEQRPELS
YLGIVQPETG EYGNLERTAT GEILLWLFPG NRPTDPAVRN FILTDEGFVP HRTYPANGYD
PRRRPFYQAA SNGPAEGTWM PAYRWIVHFS DDSEPPLWGL SYAKALRDEA GKLVSVLDTD
FDIPALNGFL KSLATEYHSR LHVVELGATP RLIGGPDVGR EPLPLPAELA SLSGFSGDAF
VDRMELEGEQ RWVGARRLDL KGGISWLVVA SRTAPFIEAP LRHQLFQVLG MGLAIALGLV
LVSVRTARRF GRPLAELERR VTGIGLHDLN ASATSPLSSA DDFRETQLLG KALDRMAAAV
RQQVRAKEQQ VASLALKGAL FDFSSAAIFS LDRQLKVIEW NAAAERLFGQ ERDGVLGRAA
GEVVTAPNGP ADWAAILGST ATGTFQFLGA HGPFDAELRF VTFTQEEREI HTFVLNDISE
RKHTERQLRQ ERDYADAVLN SLPGVFYHYD ENVRLRRWNR NLERITGYKS EELAGVEPTI
FFADEDKALV ASRIGEVFEK GESSVEADYL LKDGQRIPYL FTGVRFEYDG RRGFVGVGYD
ISERKRAEQR IRHLAMHDGL TDLPNRNLIQ ERIEQAIVRA RRGGRLLALL YLDLDRFKVL
NDGYGHLFGD AVLKTASERL LKLVREGDTV ARLGGDEFLI LLADLEQPAD ADAVARKIVG
SLDCPIVVQE RKIHLSGSIG VSLFPRDGET ADELIDNADM AMYRAKELGR NTYQFFTRAM
SLETQRRVDL EIKLRGAATA GQLQLVYQPK VSLENGGISG CEALLRWHHP ELGIVSPEHF
IPIAEDSGLI VPIGDWVLRT ACMQARAWMD AGLPPVCVAV NVSTRQFLQQ DVVAWVTRTL
RETGLPAARL ELELTESLIA RDIEKVTATI DQLKDIGVKL SIDDFGTGYS SLNYLKRFRV
DTLKIDQSFV RNMLTEMEDE TIVLAVIALA HNLKFKVIAE GVETEQHSRF LCSNGCDEIQ
GHYFSEPVTA EAFETMLRAG KHLS
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