Gene Avin_25910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_25910 
Symbol 
ID7761502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2647181 
End bp2647651 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content67% 
IMG OID643805472 
ProductLow molecular weight phosphotyrosine protein phosphatase 
Protein accessionYP_002799745 
Protein GI226944672 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTC TCTTTCTATG TACGGCCAAT AGCTGCCGCA GCGTTCTCTG CGAGGCGCTG 
TTCAACCATC TGGCGCCCGC CGGCATGCGC GCGTTCAGCG CCGGCAGCCG GCCGAGGGGC
TTCGTCCACC CGTTGACGCT CGACGCCTTG GAAAGAGCAG GCGTGGCGAT CTACGGGCTG
GCCAGTAAAT CCATTGAAAC CCATGCCGGG CTGAGGCCCG ATCTGCTCAT TACGGTCTGC
GACCGGGCGG CCGGAGAGGA CTGCCCGGTA TTCTCCGGCC CGGCGATCCG GGCCCACTGG
GAACTGGCGG ACCCCTCCGA ACTGGCGGGG ACCGGGGCAG AGGTCGCTGC CGCCTTCGAC
GCCACCGTCG CGCGGATCGG GACGCGCATC CAGGCCTTTC TCGCCTTGCC GCTCGAACGG
TTGGACAACT CGGCCCTGAA GGCCGAACTG GAGCGGATCG GCACTCTGTG A
 
Protein sequence
MKVLFLCTAN SCRSVLCEAL FNHLAPAGMR AFSAGSRPRG FVHPLTLDAL ERAGVAIYGL 
ASKSIETHAG LRPDLLITVC DRAAGEDCPV FSGPAIRAHW ELADPSELAG TGAEVAAAFD
ATVARIGTRI QAFLALPLER LDNSALKAEL ERIGTL