Gene Avin_25550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_25550 
Symbol 
ID7761467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2560619 
End bp2563042 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content49% 
IMG OID643805437 
ProductTonB-dependent siderophore receptor/ferripyoverdine receptor 
Protein accessionYP_002799710 
Protein GI226944637 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTCAC AAGCTGAATT GTCTCCCTTG GCCAAAGCAC TGCTGATGCG TCATTTTTTT 
AGACCTAGAG TCGCCGCCAC ACTAATAGTA GCCATAGCAC TTCCAGTCTC AGTGCAAATA
CAGGCCCAGG AAGTAATTTT TAATGTTCCT GCACAGCCTC TATCCTCTGC CCTTCAGGCG
TTTGGTACTC AATCGAACAT GCAGCTACTA TATAGCTATG AAATGCTTAG AGGCCTGCAC
AGCAATGAGG TCAAGGGGCC ATTCCCCCCC TTAAGTGCTT TGGAAGAACT ATTGATGGGG
ACAGGTATTG GTTATACCTT GCAAGGCGAT GTCATTACGC TTTTCAGAAA TGGAGAGTCT
GGCACTATGA CCTTGAATGC CATGACCGTG GAAGACAATG CTCTCGGCAC CATTACAGAA
AATACTAAAT CCTATACGCC CGGCACTATC GCTACTGCCA CCAGACTGGT GCTGACTCCT
CGCGAGACAC CGCAGACCGT CACAGTCGTT ACTCGCCAGC ATATGGACGA CTTCAATCTT
ACCAATATCA ACAAGGTGAT GGATCATACC CCAGGCGTCA CGCGGCGTGG CACGGATAAC
TATCGATCCT ATTACTATGC CCGTGGCTAC GAGATTCGAA ACTTCCAATA CGATGGTATC
CCCGTCTTGT CCGATGGCAT CAATTTCATG GGCGAGACCA CAAGCGATAT GATCCAATAC
GACCGCGTGG AAGTCATCAA GGGGGCTAGT GGTTTGACCA CAGGAGCGGG TAGTCCTGGT
GCCACTATCA ACCTTGTGCG CAAGAAACCT ACCCATGAGT TTTCCGGACA CGCCACGGCC
GAGTATGGTC GCTGGGATAA CTACCGTACC GAATGGGATG TAGGTGGTCC CTTGGACGAA
AGTGGGAGTA TTCGCGGTCG TTTTGCTACC GCCTTCCAAG ATCAACAATC CTATATGGAT
CATTTCAAGG AGCAGAAACG AGCCCTATAT GGCATATTGG AAGTAGATCT TTCCCCCAAG
ACGATGCTGA CATTCGGTGG TAACTACGAC AAGACAATAC CGACTGGTAG TAGTTCGGGA
GGAACACCTT TCTTCGATAG CCATAATAAT GAAGTTAATA TATCCAGATC TTTCAACCCT
GCTGCGAGTT GGAGTCGAGT GGAGCAATTC AGCCATGCTT TTTTTACCCA ACTTGACCAT
GAGTTCGACA ATGGCTGGAG CAGTCGAGTC TATTACACCT TCCAGAGAAA CGCATACGAT
GCAAACTTGG GAAGTATTAA ATACACTCCA AACGGTGATA CTGGCAGCTC CGAATTGCTT
ACTAGCCAAA ATAGGTACAA AACGAGAAGT CAGGCATTGG AGGCTTATGC CCGTGGTCCT
TTCGAATTAT TCGGCCGTAC CCACGAACTG GCCGTGGGGG TCAGCGGCTA TCATAACCAT
CTCAAGGGAT CAGGGCACAA TGTTATTAGA GTGCCTATTG ATAATATCGG GGAATGGGAT
GGACGTGCAG AGCGACCGGA CTGGGGCGGC ATCCTCTATC GTGCCGAAGA CCGTATCAAC
CAGCGTGCTG TATATGCCAG TGGCCGTTTT AGTCTAAGCG ATGATCTTGC CGTGATTTTA
GGAGGACGAG TAACTAATTA TCGCCGGGGT GGCGATAGCA ATATGCGTGA AACGGGTGAG
GTGATTCCTT TCGCGGGCGT CACCTACGAC TTGAACAACA ATTTTTCGCT GTATGCCAGC
TACACCAAGA TCTTCCGGCC GCAAAGTGTC CGGGATGAAA GTTATGCCGT ACTCGATCCG
GACGAAGGCG ATAGCTATGA AGGTGGACTC AAGGGCGAGT GGTTCAATGG CCGGTTGAAT
GCCAGCCTGG CCTATTTTGA AATCCGCCAG GATAATCGCG CTGAATCTAT CGGAGGCCTA
ACTAATAGTA ATGGAATAAC CTACACTGCT TATAGAGGGA CAAAGGCCAA GACCAAGGGT
ATTGAACTGG AGGTTAGCGG CGAATTGATG CCCGGCTGGA ATATCCAGGC AGGGTTTACT
CATCAGGTCA TCCGAGAGGA TGAAACCAAC GAGAAACTGA CGACCCAGGC ACCGGAGAAC
CAGTTCAAAC TCTATACGAC CTACCGGCTA CCTGGCAGAT TGAGTAAAAT AACCATCGGT
GGTGGCGGCA GTTACCAAGG CACGACCTGG CGGGATGGTA CGGATGCTTT AGGTAATGAG
CATCAATTCA AGAATGAAGC CTTCTGGCTA GTCAATCTGA TGGGTAGGTA TCAAATCACT
AATAATCTCT CGGCCACACT CAATGTTAAT AATTTATTTG ACAAGTATTA CTACTCTAAC
TATGGAGATC GGTGGACTGG TATAGCCACC AAGATGTATG GAGAGCCTCG TAATATGATG
TTGACAACAC GTTGGGATTT TTAA
 
Protein sequence
MPSQAELSPL AKALLMRHFF RPRVAATLIV AIALPVSVQI QAQEVIFNVP AQPLSSALQA 
FGTQSNMQLL YSYEMLRGLH SNEVKGPFPP LSALEELLMG TGIGYTLQGD VITLFRNGES
GTMTLNAMTV EDNALGTITE NTKSYTPGTI ATATRLVLTP RETPQTVTVV TRQHMDDFNL
TNINKVMDHT PGVTRRGTDN YRSYYYARGY EIRNFQYDGI PVLSDGINFM GETTSDMIQY
DRVEVIKGAS GLTTGAGSPG ATINLVRKKP THEFSGHATA EYGRWDNYRT EWDVGGPLDE
SGSIRGRFAT AFQDQQSYMD HFKEQKRALY GILEVDLSPK TMLTFGGNYD KTIPTGSSSG
GTPFFDSHNN EVNISRSFNP AASWSRVEQF SHAFFTQLDH EFDNGWSSRV YYTFQRNAYD
ANLGSIKYTP NGDTGSSELL TSQNRYKTRS QALEAYARGP FELFGRTHEL AVGVSGYHNH
LKGSGHNVIR VPIDNIGEWD GRAERPDWGG ILYRAEDRIN QRAVYASGRF SLSDDLAVIL
GGRVTNYRRG GDSNMRETGE VIPFAGVTYD LNNNFSLYAS YTKIFRPQSV RDESYAVLDP
DEGDSYEGGL KGEWFNGRLN ASLAYFEIRQ DNRAESIGGL TNSNGITYTA YRGTKAKTKG
IELEVSGELM PGWNIQAGFT HQVIREDETN EKLTTQAPEN QFKLYTTYRL PGRLSKITIG
GGGSYQGTTW RDGTDALGNE HQFKNEAFWL VNLMGRYQIT NNLSATLNVN NLFDKYYYSN
YGDRWTGIAT KMYGEPRNMM LTTRWDF