| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_25530 |
|---|
| Symbol | |
|---|
| ID | 7761465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 2559365 |
|---|
| End bp | 2560162 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643805435 |
|---|
| Product | Integrase, catalytic domain-containing protein |
|---|
| Protein accession | YP_002799708 |
|---|
| Protein GI | 226944635 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAGA TTCTTCACAA ACGCGCCACG ACCACGCACG CCATCCGAGC AGAAATACAG
CGATCGCAAG ATTCGATCGC GGCGCTGAGC AGGCGCTACC ACCTCAACCC CAAGACCGTT
CGCAAATGGC GTAGTCGCGA CACGGTCGAG GATGCACCCA TGGGGCCCAG CGCCCCGCGC
TCGACCTCCC TGACACTGCT GCAGGAAGCC GCCGCACTGG TGTTCCGGCA GAAGACGCTG
CTGCCGCTGG ATGACTGCCT GCATGCGCTG CAACGGACTA TCCCCACGCT GACCCGCTCG
AGCCTGCACC GCCTTTTCCA GCGCCACGGC GTCAGCCAGT TGCCTCGTGC GAGCGAGCCG
GGCCGTGAGA AAAAACCCTT CAAGCGCTAT CCACTCGGCT ATCTGCACAT CGACATCACC
GAGACTCGAA CCACCGAGGG CAAGGCCTGT CTCTTCGTCG CGATCGACCG AACCAGCAAA
TTTGTCCATG CCGGGTTGTA CGCGCAGGCC ACCCGCAAGA GCGCCGTCGA CTTCCTGCAC
GCCACCCTGA AGGCCTTGCC GTATCGCGTC CACACGGTCC TGACCGACAA CGGCATCCAG
TTCGCCAAAA AGGCCGAAAC CGAGGCTTAT CGGACGCATC CGTTCGATGC GCTCTGCCAG
CGGCACGGCA TCGAACACCG CCTGACCAAA CCCTTCCATC CCTGGACCAA CGGCCAGGTC
GAGCGGATGA ACCGGACGAT CAAGGACGCC ACGACCAAAG CGTTTCACTA CACCTCGCTC
GAGGAGCTCC GGTCCTGA
|
|---|
| Protein sequence | MAQILHKRAT TTHAIRAEIQ RSQDSIAALS RRYHLNPKTV RKWRSRDTVE DAPMGPSAPR
STSLTLLQEA AALVFRQKTL LPLDDCLHAL QRTIPTLTRS SLHRLFQRHG VSQLPRASEP
GREKKPFKRY PLGYLHIDIT ETRTTEGKAC LFVAIDRTSK FVHAGLYAQA TRKSAVDFLH
ATLKALPYRV HTVLTDNGIQ FAKKAETEAY RTHPFDALCQ RHGIEHRLTK PFHPWTNGQV
ERMNRTIKDA TTKAFHYTSL EELRS
|
|---|
| |