Gene Avin_25400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_25400 
SymbolfpvR 
ID7761453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2546970 
End bp2547803 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content60% 
IMG OID643805424 
ProductAnti-sigma factor, FecR family 
Protein accessionYP_002799697 
Protein GI226944624 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGAGT ACCAGGCAAT GCTCGACATA TGGCTGGTCA GCGAGCACCT GCCTGTCCAG 
GCGATAGCTG GAGATTCGGT TCGGACCTCG CCTCGGCGGC GCTCGCGCAG GCCTGCCTTG
GCGGCCGCGG CTTTGTTGCT TCTTTCGCTG GGTAGTCTGC TGGGCTGGCA GCAAGGATGG
CTTCCCAACC ACATTCAGCG CTTCCATGCC GAGGACAGTA CTCGCGAAGT GATCCTGGCG
GATGGATCGC GCGTGCACTT GAATCTGGAT ACCACGCTAT GGTTCGTCAA TTTCCGTGAT
CGCCGCAGTG TGAAACTCAG TGAGGGCGAA GCCTTCTTCG AGGTTCAGCA CGATGCCCGC
CACCCATTCG TGGTGTATGC CGGCAAGGGC AGCGTTACCG TCACCGGCAC CCGCTTCAAC
GTATGGAAAT ATGCGGACCA GGTGGTCGTC ACCCTGACCG AAGGTTCGGT CAAGGTACAT
GGCGATACGG AACAGCCCGA CCAGGTGACT TACCTATCTC CTGGCTTGCA GGCTCGTTAC
GGAAACGATG GCGAACTGCC GCAGATATCG ACCGCCAAAG CCGAGGCCCT GGCTTGGCGT
GAAGGCAAGC TGGTCCTCGA CGACCTTACG CTCGCCGAGG CCCTCCCCTA TATCAATCGT
TACCTGGACA AGCCCATTCT GCTTGCCGAT CAGGCCACCG CTGACCTGCG CATCGGCGGC
ATCTATGACA CCCGCAACAT CGGACAACTG GTCCAGGTCC TGCCCAAGGT TCTACCGATC
TACCTGAGCC GGAACAGTGA CGATGCCACG GTCATCGGTA GCCGGCCGCG TTAA
 
Protein sequence
MREYQAMLDI WLVSEHLPVQ AIAGDSVRTS PRRRSRRPAL AAAALLLLSL GSLLGWQQGW 
LPNHIQRFHA EDSTREVILA DGSRVHLNLD TTLWFVNFRD RRSVKLSEGE AFFEVQHDAR
HPFVVYAGKG SVTVTGTRFN VWKYADQVVV TLTEGSVKVH GDTEQPDQVT YLSPGLQARY
GNDGELPQIS TAKAEALAWR EGKLVLDDLT LAEALPYINR YLDKPILLAD QATADLRIGG
IYDTRNIGQL VQVLPKVLPI YLSRNSDDAT VIGSRPR