Gene Avin_25320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_25320 
Symbol 
ID7761445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2535742 
End bp2537316 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content63% 
IMG OID643805416 
Productmembrane protein 
Protein accessionYP_002799689 
Protein GI226944616 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTGC GGGGTTTTCG TCAAGCCAAT GCCTGGCTGC ACAACTGGAC CGGCCTGCTG 
CTGGGCTGGT TGTTGTATGC CATCTTCCTC ACCGGAACCC TCTGTTTCTT CCAGAACGAA
ATCACTCTAT GGATGAAGCC CGAGCAGCAC GGCTCGCATC CCGATGCCGG CTCGGCGGAG
CGCGCCTGGG CTACCCTGCA GCGCTTGGCC CCGACTGCCG AGCAGTGGCG CATTCAACTG
CCAGGTGAGC GCAACACCGC CATACAAGTG AATTGGAACG AACCCGGCCA GGAAAAAAGA
CATGCCCTGA CCCTGGACGC AGCAAGCGGC GAACCGCTGG AAGTGCGCGA AACGCTCGGG
GGTCAGTTCT TCTATCGCTT CCACTTCCAA CTGTTCGGCA TCGACTACAT GTGGGGTCGC
TGGATCGTCT GCATCGCCAC TATGCTCATG CTGGTCGCCA TCGTCAGCGG CGTGATCGTC
CACAAGAAAA TCTTCCAGGA ATTCTTCACC TTCCGCCCGG GCAAAAGCCA GCGCGCCTGG
CTCGATGCCC ACAACGCAAC AGCGGTCCTG GCCCTGCCGT TTCATCTGAT GATCACCTAC
AGCGGCCTTC TGCTGTTTAT GTACATGTTG ATGCCCTGGG GCATGCAAAG CGTCTACCAG
GACGATACCC GACGCTTCTT CAGCGAACTC TTCCCGCGTG ACCCCGTCGA GGCCAATCCG
GCACCGATGC AGAACGGCGT TCCCCTGACC GACCTGCGCC CACTGCTCGA TGAGGCCGAA
CGACACTGGC CACGCGGCGT CGGCAGTATC GAGGTCCGTC GACCGGGAAC CGAACTGGCC
GTCATCGAAC TGCGCGAACT GGGCGGCGAC AGCCTGCTCG ACCGGGGCGC CGGCGAGCGC
CTGCGCTTCG ACGGCACGAC CGGCGAACCG CTGGACATCC CTCCGCAGGC CGATGGCGGG
ACGGCCAAGG CCGTCTACAA CGTGCTGACC GGCCTGCACC TGCTGCGTTT CGCCGGCGTG
GAAATGCGCT GGTTCTTTTT TCTGAGCGGC CTGCTGGGCA CGGCAATGAT CGCCACCGGC
CTCGTCCTGT GGGTGGGAAA ACGGTTGCCG AAACGGCGCA AGAGCGGCAC CACGCCCTTC
GGCCATCGTC TGGTCGAAGT GTTGAATGTC GGCACCGTCG CCGGGCTCCC CGTGGCCATC
GCCGCCTATT TCTGGGCCAA CCGCCTGCTG CCGCTGGGCC TGGCACAGCG TATCGACTGG
GAAATCCGCT GCCTCTTCAT CGCCTGGGCG CTTTGCCTTG TCCATCCGTT GCTGCGCTCC
TACAGGCGCG CCTGGATCGA ACAACTGGCC TTGGCCAGCC TGCTGTATGC CGGTCTGCCA
CTGCTCAACC TCTCCCTGCC GGATAGCCAT CTGCTGACCA CGCTGGCCCA TGGACAATGG
CTGGTGGCCG GTATGGATCT GACGCTACTC GCACTCGCCG CCCTGTTCGG ACTGGCCGCC
TGGAAGCTGA CCAGGCTGCC GTCCAGCGCC GTGCAAAACC CGACCCGCAA GGCCCCCCAG
GAGGCACCGA TATGA
 
Protein sequence
MKVRGFRQAN AWLHNWTGLL LGWLLYAIFL TGTLCFFQNE ITLWMKPEQH GSHPDAGSAE 
RAWATLQRLA PTAEQWRIQL PGERNTAIQV NWNEPGQEKR HALTLDAASG EPLEVRETLG
GQFFYRFHFQ LFGIDYMWGR WIVCIATMLM LVAIVSGVIV HKKIFQEFFT FRPGKSQRAW
LDAHNATAVL ALPFHLMITY SGLLLFMYML MPWGMQSVYQ DDTRRFFSEL FPRDPVEANP
APMQNGVPLT DLRPLLDEAE RHWPRGVGSI EVRRPGTELA VIELRELGGD SLLDRGAGER
LRFDGTTGEP LDIPPQADGG TAKAVYNVLT GLHLLRFAGV EMRWFFFLSG LLGTAMIATG
LVLWVGKRLP KRRKSGTTPF GHRLVEVLNV GTVAGLPVAI AAYFWANRLL PLGLAQRIDW
EIRCLFIAWA LCLVHPLLRS YRRAWIEQLA LASLLYAGLP LLNLSLPDSH LLTTLAHGQW
LVAGMDLTLL ALAALFGLAA WKLTRLPSSA VQNPTRKAPQ EAPI