| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_25220 |
|---|
| Symbol | |
|---|
| ID | 7761436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 2527515 |
|---|
| End bp | 2528390 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643805408 |
|---|
| Product | 3-hydroxybutyryl-CoA dehydrogenase |
|---|
| Protein accession | YP_002799681 |
|---|
| Protein GI | 226944608 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.224387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATC AGAAGAACAG CAACGATGGA AAACCACGCG TCGCCATCAT CGGTGCCGGC
ACCATGGGCA ACGGCATTGC CCAGGTCTGC GCGCTGGCAG GTCGGCAAGT CATCCTCGTG
GATATCTCCG ACAACGCCTT GGAGCGTGGC ATCGCGACCC TCTCCGGCAA CCTGGAACGC
CAGGTGAAGA AGGGGTTGAT CGACGAGGCG GACAGGCAGG CAGCCCTGGG CCGTATCCAA
CCGCAGACCC ATTACGGCGC GCTTGCCGGC AGCGAACTGG TCATCGAGGC GGCCAGCGAG
AATCTCGAGC TCAAGCGACA GATCCTCACC CTGATCGAGG AAGCGACGGA GTCCGACGCC
CTGATCGCCA GCAACACCTC CTCGCTGTCG ATCAGCGAAT TGGCGAGCGT ACTGGGAAAA
CCCGAACGAT TCATCGGCCT GCACTTCTTC AACCCGGTGC CGGTCATGAC CCTGGTCGAG
GTCATCCGTG GCCTGCAGAC CGCCGAAGCC ACCTATGCCA AAGCCCTCGC ATTCGCCGGG
CAGATCGGCA AGACCGCCAT CTCGGTGCGC AACAGTCCGG GTTTCGTGGT CAACCGCATC
CTCTGTCCGA TGATCAACGA AGCGATTTTC GTCCTCCAGG AAGGCCTGGC CAGCGCCGAG
GACATCGACA CCGGCATGCG GCTCGGCTGC AATCACCCCA TCGGCCCCCT GGCGCTGGCC
GACCTGATCG GCCTGGACAC GCTGCTGGCG ATTCTCGAAA CCTTCCATCG CGATTTCGGC
GACCCCAAGT ACCGTCCGTC CACCCTGCTC AAGGAAATGG TCGCGGCCGG TTATCTGGGT
CGCAAGAGCG GCCGCGGCTT CCACTCTTAC ACCTGA
|
|---|
| Protein sequence | MNDQKNSNDG KPRVAIIGAG TMGNGIAQVC ALAGRQVILV DISDNALERG IATLSGNLER
QVKKGLIDEA DRQAALGRIQ PQTHYGALAG SELVIEAASE NLELKRQILT LIEEATESDA
LIASNTSSLS ISELASVLGK PERFIGLHFF NPVPVMTLVE VIRGLQTAEA TYAKALAFAG
QIGKTAISVR NSPGFVVNRI LCPMINEAIF VLQEGLASAE DIDTGMRLGC NHPIGPLALA
DLIGLDTLLA ILETFHRDFG DPKYRPSTLL KEMVAAGYLG RKSGRGFHSY T
|
|---|
| |