Gene Avin_25180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_25180 
Symbol 
ID7761432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2519509 
End bp2520051 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content63% 
IMG OID643805402 
Productsensor domain protein 
Protein accessionYP_002799677 
Protein GI226944604 
COG category[T] Signal transduction mechanisms 
COG ID[COG3300] MHYT domain (predicted integral membrane sensor domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGCAT CCGACAGCTT CTTCATCGAC GCAGCAACCA ATGCGTCCTA TCTGCCGGGT 
GCATATCATC CCGGCCTGGT TCTGCTGTCC ATCTTCGTGT CGATCTTCTC AGCCACGATG
GCGCTGCAGA CGGCGCAGAT CGCCCGACGT GCCGAAAGCG CGCTGTATCG CCATATCACC
ATCGGCGCCG GAGCCATCGC CCTGGGCTGC GGCATATGGA CGATGCACTT CATTGGCATG
CTGGCATTCG AGTTGCCCAC GCATGTCCAC TACTCGACCG GCTTGACCCT GCTGTCCTTG
CTGCCGGCCT GCGCCGCTTC GTGGCTCGCC CTGCATATGC TGGTCCGCCC CGAGGTCGAC
GGCCCGCAAC TGGCCATGAG CGGCACATTG GTCGGCCTGG GCATCGGCGC CATGCACTAC
AGCGGCATGG CTGCCATGCA GACTCCGCTG CTGATGTACT ACGAACCGGT CACCTTCACC
CTATCCATCG TTGTAGCGAT CAGTCTGGCC GTCCTCGCAC TGTGGGCAAG GACGGCAGCC
TGA
 
Protein sequence
MGASDSFFID AATNASYLPG AYHPGLVLLS IFVSIFSATM ALQTAQIARR AESALYRHIT 
IGAGAIALGC GIWTMHFIGM LAFELPTHVH YSTGLTLLSL LPACAASWLA LHMLVRPEVD
GPQLAMSGTL VGLGIGAMHY SGMAAMQTPL LMYYEPVTFT LSIVVAISLA VLALWARTAA