Gene Avin_25080 details

Gene Information

• Locus tag: Avin_25080
• ID: 7761422
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 2509660
• End bp: 2510235
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643805392
• Product: Transcriptional regulator, TetR family
• Protein accession: YP_002799667
• Protein GI: 226944594
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCGTC CAAGAAGCGA AGAAAAGCGC CTGGCCCTGC TGAACGCCGC CGCCGAGACC 
GTGGCCGAGC ATGGCTTGGC TGCGTCCCCG ACCTCGCTGA TCGCGAAGAA GGCCGGCGTC 
GCCGAAGGAA CGCTCTTTCG CTATTTCCCG ACGAAGGACG ATCTCCTGAA CGAGCTTTAC 
CTCCACCTCA AGCAGGACAT GTGCGAGGCG ATGAAGAAGC ATTACACCGC CACCGCCGCA 
TCCCCCCTCC GCGAACGCGC ACAATCCCTG TGGAACAGCT ACATCGACTG GGGGCTCGCC 
CATCCCTTGG CCAACAAGGC GGTCAACCAG CTTGCCGTCT CGTCGTCCCT CACCCCGGAA 
ACGCTTGCCA AGGCACAGGC CATGTTCCCG GAGGCCGTTG CCGAGACAGA ACTCTCGGGG 
AACCAGGTGT TCGCGGGACA AACGGACTTC GCCGATGCCG TCTTCCTCGC GCTTGCCGAT 
ACCACGATGG CCTTTGCCGC GCGGCACCCC AGGAAAGCCA AAGCCTACAA GGCCAGCGGC 
TTCGAGGCCA TGTGGAAGAT GTTCAATGAT GATTGA 

 

Protein sequence

MARPRSEEKR LALLNAAAET VAEHGLAASP TSLIAKKAGV AEGTLFRYFP TKDDLLNELY 
LHLKQDMCEA MKKHYTATAA SPLRERAQSL WNSYIDWGLA HPLANKAVNQ LAVSSSLTPE 
TLAKAQAMFP EAVAETELSG NQVFAGQTDF ADAVFLALAD TTMAFAARHP RKAKAYKASG 
FEAMWKMFND D