Gene Avin_24940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_24940 
Symbol 
ID7761408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2496814 
End bp2498094 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content61% 
IMG OID643805376 
Productmetabolite:proton symporter protein 
Protein accessionYP_002799653 
Protein GI226944580 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00883] metabolite-proton symporter 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.334576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTCA GCAGGCGCCT GAGATCGATC TTTTCCGGTT CGGTCGGCAA TCTCGTGGAG 
TATTTCGATT GGTATGTTTA TGCAGCCTTT TCTTTCTACT TCGCGCCGAA GTTCTTTCCC
GCCGGCGACC AAACGGCGCA ACTGATGAAC ACGGCCGGGA TCTTCGCCCT CGGTTTTCTG
GTGCGGCCGC TGGGTGGCTG GCTGCTGGGA AGTTATGCCG ACCGCAGAGG ACGCAAAGCG
GCCTTGCTGC TGTCGGTCGC CCTGATGTGC CTGGGTTCGC TGATCATCGC CTGCCTGCCC
GGCTATGACG AGATAGGCGT GCTGGCGCCC GTGTTGCTCC TGGTCGCGCG GCTGTTGCAG
GGCATCAGCC TGGGCGGGGA ATATGGCAGT TCGGCGACCT ATCTCAGCGA GATGGCCACC
CCGAACCGGC GCGGGTTCTA CTCGAGTTTC CAATACGTCA CGATCATTCT CGGGCAATTG
CTCGCGCTCG GCCTGTTGAT CGTTCTCCAG CGTTTCGTCC TGACCTCCGA ACAGCTTCAC
GACTGGGGCT GGCGAATCCC CTTTCTGATC GGCTCCGGTA TCGCGGCGCT GGCCATCTGG
CTGCGCCGCA ACATGCAGGA AACCGACTCC TTCAACGACC ACCGCTCGGG CTCCGCCAGA
AAGAGCAATC TTCGCGAGCT GGCCCGGCAT CCGCGGGAAG TCGGCATCGT GGTCGCCCTG
ACGGCCGGCG GAACGCTGTC CTTCTACACG TTCACCACTT ACATGCAGAA GTACCTCGTG
AATACCACGG GCTTCAGCAA GGATGACGCC ACGCTCATTT CCTCGCTGGC CCTGCTGGTT
TTCATGGTCA TCCAGCCGAT CGTCGGCCTG CTTTCCGATT ATGTCGGCCG ACGCCTGATG
CTGATCGCCT TCGGTGCGCT GGCCACCCTG TTCACCGTGC CCATTCTCAG TGCCCTGGCC
GTCAAGCAGA GCATGGGGGT CACGCTGCTC TGGTATATCG CCGCGCTGCT CATCACCACG
GGCTATACCT CCATCAACGC CATCTTCAAG GCGGAACTGT TTCCGGTCCA TATCCGTGCC
CTTGGCGTCG GCTTCCCCTT CGCGGTGACC GTATCGTTGT TCGGCGGAAC CGCCGAATAC
ATCGCCCTGT GGCTGAAAAG CATCGGCCAC GAGAGCTGGT TCTACTACTA CGTCAGCGCC
TGTGCCGCGG TATCCCTGAT CGTCGCCCTG TGCATGAAAG ACACCAAGGC GACCTCGCGG
ATGGACGCCG GACACGCATG A
 
Protein sequence
MTFSRRLRSI FSGSVGNLVE YFDWYVYAAF SFYFAPKFFP AGDQTAQLMN TAGIFALGFL 
VRPLGGWLLG SYADRRGRKA ALLLSVALMC LGSLIIACLP GYDEIGVLAP VLLLVARLLQ
GISLGGEYGS SATYLSEMAT PNRRGFYSSF QYVTIILGQL LALGLLIVLQ RFVLTSEQLH
DWGWRIPFLI GSGIAALAIW LRRNMQETDS FNDHRSGSAR KSNLRELARH PREVGIVVAL
TAGGTLSFYT FTTYMQKYLV NTTGFSKDDA TLISSLALLV FMVIQPIVGL LSDYVGRRLM
LIAFGALATL FTVPILSALA VKQSMGVTLL WYIAALLITT GYTSINAIFK AELFPVHIRA
LGVGFPFAVT VSLFGGTAEY IALWLKSIGH ESWFYYYVSA CAAVSLIVAL CMKDTKATSR
MDAGHA