Gene Avin_24880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_24880 
SymboltreY 
ID7761402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2485627 
End bp2488380 
Gene Length2754 bp 
Protein Length917 aa 
Translation table11 
GC content72% 
IMG OID643805370 
Productmaltooligosyl trehalose synthase 
Protein accessionYP_002799647 
Protein GI226944574 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3280] Maltooligosyl trehalose synthase 
TIGRFAM ID[TIGR02401] malto-oligosyltrehalose synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.022043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCC CGCGCGCCAC CCTGCGCCTG CAATTTCACA GCGACTTCAC CCTCGACGAC 
GCCGTGCCGC TGGTCGACTA CTTCGCCGAC CTCGGCATCA GCCACCTGTA CGCCTCGCCG
CTGCTCACCG CGCGCCCCGG CTCGCGGCAC GGCTACGATG TCATCGACCC GACCCGGATC
AACCCCGAAC TGGGGGGCGA GCCGGCCCTG CGGCGCCTGG TCGAAGCCCT GCGCAGCCAC
GGCATGGGGC TGATCCTGGA TATCGTCTCC AACCACATGG CGGTCGGCGG CGCCGGCAAC
CCCTGGTGGC TCGACGTGCT GGAGTGGGGC CGGCGCAGCC CCTACGCCGC TTTCTTCGAC
ATCCAGTGGA ACTCCCCTGA CCCGCTGCTG GAAGGCCAGT TGCTGGTGCC CTTCCTGCGC
AGCGACTACG GCGAGGTCCT GCAGGGCGGC GAAATCCCCC TGCGCTTCGA CGCACAGGCC
GGCGTCTTTT ACGCCAGTCA CCATGAACAC CGCTTCCCCA TCGGCCCGCC GAGCTACGGC
GAACTGCTGG GCGCCAGCGA CCACCCGGCG CTGCGGGAAC TGGCCGCGCA GTTCGATGCC
CTCGCCGGCG AAGGGGGCTA CCGGCGAGCC GCCGAGCTGA AGGCCAGGCT GTCGCGACTG
GCCGCCCGGC CCGCGGTGCG CATCGCCATC GAGGCCCTGC TCGCCGCCTA CGACGCGCGC
CAGCCGCAAG GCTTCGCACG CCTGCACGCC CTGTTCGAAC GGCAGTTCTA CCGGCTGGCC
AGTTGGCGCA CCGCGGCGGA CGACATCAAC TGGCGGCGCT TCTTCGACAT CAACGAACTC
GGCGGCCTGC GCGTGGAACG CCCACGGGTC TTCGAGGCCA CCCACGCGAA GATCTTCCAG
TTGTTCGAGG AAGGCCTGAT CGACGGCCTG CGCATCGACC ACATCGACGG CCTGGCCGAC
CCGCACGGCT ACTGCCGGCG CCTGCGCCGC CGCCTGGAAC GGCTCGGCCG GGGCCGGCGG
CGGCCGATCT ACGTGGAAAA GATCCTCGGC CAGGGCGAGG AACTGCATGG CGACTGGCTG
GTGGACGGCA CCACCGGCTA CGAATTCATG AACCAGGTGT CCCTGCTGCA GCACGCCCCC
GACGGAGCAG GACCGCTGCG CGTGCTCTGG CACAGCCTCG GCGGGCGCCC CGCCGACTTT
CTCGAAGAAG TGCGCCAGGC CCGCCGGCTG GTGCTCACCG GAACCCTGGC CGGCGACTTC
GAAAGCGCCG CCCAGGCGCT GCTGCAGGTG GCGCGCGGCG ACCTGATGAC CCGCGACATC
ACCTTCGGCC AGATCCGCCG GGCACTGCTC GAACTGATCG TCCACTTTCC CGTGTACCGC
ACCTACATCG GCGCCTGCGG CCGTCCCGCC CAGGACGAGC CCTTCTTCCG CCAGGCCCTG
GAAGGCGCCC GCGACGGTCT CGACGAAGCC GACTGGCCGC TGCTCGCCCA CCTGGATCGC
TGGCTCGGCG GCGAGCCCTG GCGCCGCCTG CCGCCGGGAC CACGGCGCAA GGCGCGCCGC
CACGCCTGCG TGCGCTTCCA GCAGGTCACC GCGCCGACCG CCGCCAAGGC GGTGGAGGAC
ACCGCCCTCT ACCGCTCGGG CGTGCTGCTC TCGCGCAACG ACGTCGGTTT CGACAGCCAA
TGCTTCGCCG CCCCGCCGGA AGACTTCCAC ACCGCCTGCC TGCGCCGGCG CGAACGCTTT
CCCGACAGCC TGCTGGCCAG CGCCACCCAC GATCACAAGC GCGGCGAAGA CAGCCGCGCG
CGCCTGGCCG TGCTCAGCGA ACGCGCCGGC TGGTACGGAG AGCGACTGCA GCGCTGGCTG
CTGCTGGCCC AGCCGCTGCG CCGCAGCCAT GGCGACGGTC CGGCACCGCT TCCGGTCGAC
GAGCTGATGC TCTACCAGAC CCTGCTCGGC AGTTGGCCGC CGGACCTGGC GCCGGACGAC
GAGGCGGGCA TGCGCGCCTA TGCCGGACGG CTGCGCCAGT GGCAGGAGAA GGCCTTGCGC
GAGGCCAAGC TGAACAGCGC TTGGAGCGCG CCCAACGCTC CCTACGAGGC GGCCTGCCGC
GCCTTTCTCG ACGACCTGCT GGAAAATCCC GTGGGCGTCC GGCTGCGCGA GGAGATCGCC
GCCGCGGCCG CCGCCATCGC CCCGGCCGGC GCCCTCAACA GCCTGGCCCA GACCCTGCTG
CGGATGACCG TGCCCGGCGT GCCCGACCTC TACCAGGGCA ACGAATTCTG GGATTTCAGC
CTGGTCGACC CGGACAACCG CCGGCCGGTG GATTTCGCCG CCCGCCGCCA GGCCCTGGCC
CAGGGCCGGG AGCCCGCCGA ACTCATCGGC CACTGGCGCG ACGGGCGCCT CAAGCAGGCC
CTCATCGCCC GTACCCTGGC CCTGCGCGCA CGCTGTCCGG CGCTGTTCTC CGCCGGCGAC
TACCTGCCGC TGAAAGTGGT CGGCGAGCAG CGTGCGCGGC TGCTGGCCTT CGCCCGGCGG
CACGCCGGAC AATGGGCGCT GATACTGGCG CCGCGCCTGG CCGGCGACCT GCTCGGCGAG
GCCGAACGGC CCGCGATCGA ACCGGCGCGC TGGACGGATA CCCGCGTGCT GCTCCCCGAG
ATCCCCGCGC TGCGGGGCGT CCTTTCCGGC GAGACGGTCC CGCGCGGAAA GAGCGAACTG
TTCGTGGGAG AAGCCCTGGC GACCTTCCCG GTCGGCCTCT TCCATGGCGC ATGA
 
Protein sequence
MSGPRATLRL QFHSDFTLDD AVPLVDYFAD LGISHLYASP LLTARPGSRH GYDVIDPTRI 
NPELGGEPAL RRLVEALRSH GMGLILDIVS NHMAVGGAGN PWWLDVLEWG RRSPYAAFFD
IQWNSPDPLL EGQLLVPFLR SDYGEVLQGG EIPLRFDAQA GVFYASHHEH RFPIGPPSYG
ELLGASDHPA LRELAAQFDA LAGEGGYRRA AELKARLSRL AARPAVRIAI EALLAAYDAR
QPQGFARLHA LFERQFYRLA SWRTAADDIN WRRFFDINEL GGLRVERPRV FEATHAKIFQ
LFEEGLIDGL RIDHIDGLAD PHGYCRRLRR RLERLGRGRR RPIYVEKILG QGEELHGDWL
VDGTTGYEFM NQVSLLQHAP DGAGPLRVLW HSLGGRPADF LEEVRQARRL VLTGTLAGDF
ESAAQALLQV ARGDLMTRDI TFGQIRRALL ELIVHFPVYR TYIGACGRPA QDEPFFRQAL
EGARDGLDEA DWPLLAHLDR WLGGEPWRRL PPGPRRKARR HACVRFQQVT APTAAKAVED
TALYRSGVLL SRNDVGFDSQ CFAAPPEDFH TACLRRRERF PDSLLASATH DHKRGEDSRA
RLAVLSERAG WYGERLQRWL LLAQPLRRSH GDGPAPLPVD ELMLYQTLLG SWPPDLAPDD
EAGMRAYAGR LRQWQEKALR EAKLNSAWSA PNAPYEAACR AFLDDLLENP VGVRLREEIA
AAAAAIAPAG ALNSLAQTLL RMTVPGVPDL YQGNEFWDFS LVDPDNRRPV DFAARRQALA
QGREPAELIG HWRDGRLKQA LIARTLALRA RCPALFSAGD YLPLKVVGEQ RARLLAFARR
HAGQWALILA PRLAGDLLGE AERPAIEPAR WTDTRVLLPE IPALRGVLSG ETVPRGKSEL
FVGEALATFP VGLFHGA