| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_24860 |
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| Symbol | glgX |
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| ID | 7761400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 2482987 |
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| End bp | 2485149 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643805368 |
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| Product | glycogen debranching enzyme |
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| Protein accession | YP_002799645 |
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| Protein GI | 226944572 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.624836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGGC ACAGGAAAAC CAGGACAGCC CAGGTGAAGA CATCCTCGCG CGTCCGCGAG
GGCCTGCCCT TCCCCCTCGG CGCGACCTGG GACGGTCTGG GCGTCAACTT CGCGCTGTTC
TCCGCCCACG CCACCAAGGT GGAACTCTGC CTGTTCGACA AGGCCGGGCG CACCGAACTG
GAGCGCATCG AGCTGCCCGA ATACACCGAC GAGATCTGGC ACGGCTACCT GCCGGACGCC
CATCCGGGCC TGGTCTACGG CTACCGGGTG CACGGCCCCT ACGCGCCGGA TGCCGGGCAC
CGCTTCAATC CCAACAAACT GCTGATCGAT CCCTACGCCA AGCAACTGGT TGGCGAACTG
CGCTGGTCCG AGTCGCTGTT CGGCTACACC GTCGGCCACC CGGACGCCGA TTTCAGTTTC
GATGAGCGCG ACAGCGCCCC CTACGTGCCC AAGAGCAAGG TCATCGACCC GGCCTTCACT
TGGGGTCGCG ACCGCCCGAT GCAGACCCCC TGGGACCACA CCATCCTCTA CGAGACCCAC
CTGCGCGGCT TCACCATGCG CCATCCGGCG GTGCCGCCGG CGCTGCGCGG CACCTGCGCC
GGCCTGATGA ACGCCGAAGT GCTCGACTAC CTGCTCCAGC TCGGCGTCTC GGCGATCGAG
CTGCTGCCGG TCCATGCCTT CGTCCAGGAC CAGCACCTGC TGGAAAAGGG CATGACCAAC
TACTGGGGCT ACAACACCAT CGGCTTCTTC GCCCCGCACC CGCGCTACCT GGCCAGCGGC
AAGGTCCAGG AGTTCAAGGA GATGGTCGCG CACCTGCACC ACGCGGGCCT GGAGGTGATC
CTCGACGTGG TCTACAACCA CACCGCCGAA GGCAACGAAC TGGGGCCGAC CCTCTCCATG
CGCGGCATCG ACAATGCCAC CTACTACCGC CTGATACCGG GCGACCGGCG CTACTACATC
AACGACTCGG GCACCGGCAA CACGCTCGAC CTCTCCCACC CCTGCGTGCT GCAGATGGTC
ACCGACTCGC TGCGCTACTG GGCCACGGAG ATGCACGTGG ACGGCTTCCG CTTCGACCTG
GCGACCATCC TCGGCCGTCG CCCGGAAGGC TTCGACGAAC GCCACAGTTT CCTGGTCGCC
TGCCGCCAGG ACCCGGTGCT GCGCCAGACC AAGCTGATCG CCGAGCCCTG GGACTGCGGA
CCGGGCGGCT ATCGGGTCGG CGGCTTCCCG CCCGGCTGGG CGGAATGGAA CGACCGCTTC
CGCGACACCG TGCGGGCCTT CTGGAAAGGC GACGAAAACC AGTTGGCGGA TATCGCCAGA
CGCCTCACCG CCTCCGGGGA CCTCTACAAC CAGCGCGGCC GGCGGCCGTT CGCCTCGGTC
AACTTCATCA CCGCCCACGA CGGCTTCACC CTCAACGACC TGGTCTCCTA CAACGACAAG
CACAACGAAG CCAACGACGA GAACAACCAG GACGGCACCG ACAACAACCT GTCCTGGAAC
CACGGCGTCG AGGGTCCCGC CGACGACCCG CAGATCCGCG AACTGCGCAT CCGGCAGATG
CGCAACTTCC TCGCCACCCT GCTGCTGTCC CAGGGCACGC CGATGCTGGT CGCCGGCGAC
GAATTCGCCC GCACCCAGCA CGGCAACAAC AACGCCTACT GCCAGGACAG CGAGATCGGC
TGGGTCGACT GGCGGCTCGA CGAGGACGCC AGGGCCCTGC AGGCGTTCGT GCGCCACCTG
ATCCGCCTGC GCCTGCGCTT TCCCATGTTG CGCCGCGGGC GCTTCCTGGT CGGCGCCTTC
AACGAGGAAC TGGGTATCAA GGACGTCACC TGGCTGAACC CTTCCGGCAC CGAGATGACC
ATCGAGCAAT GGGAGGAAGA GCACAACCGC TGCCTCGGCA TGCTGCTCGA CGGCCGCGCC
CAGCCGACCG GCATCCGCCG CGCCGGCTCC GACGCCACCC TGCTGCTGGT GGTGAACGCC
CACTACGACC TGGTCAACTT CCACCTGCCG GAGGTCGCCC AGGGCCGGCG CTGGCGGCGC
CTGATCGACA CCCACAAGCC GACGGCGGCG GAAGAGCGCT TCGCCTTCGG CACCGAGTAC
GGCGTCACCG GCCGCTCGCT CCTGCTGTTC GAACTGCTGC GCAACAACAA ACGGAGCACC
TGA
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| Protein sequence | MDRHRKTRTA QVKTSSRVRE GLPFPLGATW DGLGVNFALF SAHATKVELC LFDKAGRTEL
ERIELPEYTD EIWHGYLPDA HPGLVYGYRV HGPYAPDAGH RFNPNKLLID PYAKQLVGEL
RWSESLFGYT VGHPDADFSF DERDSAPYVP KSKVIDPAFT WGRDRPMQTP WDHTILYETH
LRGFTMRHPA VPPALRGTCA GLMNAEVLDY LLQLGVSAIE LLPVHAFVQD QHLLEKGMTN
YWGYNTIGFF APHPRYLASG KVQEFKEMVA HLHHAGLEVI LDVVYNHTAE GNELGPTLSM
RGIDNATYYR LIPGDRRYYI NDSGTGNTLD LSHPCVLQMV TDSLRYWATE MHVDGFRFDL
ATILGRRPEG FDERHSFLVA CRQDPVLRQT KLIAEPWDCG PGGYRVGGFP PGWAEWNDRF
RDTVRAFWKG DENQLADIAR RLTASGDLYN QRGRRPFASV NFITAHDGFT LNDLVSYNDK
HNEANDENNQ DGTDNNLSWN HGVEGPADDP QIRELRIRQM RNFLATLLLS QGTPMLVAGD
EFARTQHGNN NAYCQDSEIG WVDWRLDEDA RALQAFVRHL IRLRLRFPML RRGRFLVGAF
NEELGIKDVT WLNPSGTEMT IEQWEEEHNR CLGMLLDGRA QPTGIRRAGS DATLLLVVNA
HYDLVNFHLP EVAQGRRWRR LIDTHKPTAA EERFAFGTEY GVTGRSLLLF ELLRNNKRST
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