Gene Avin_24540 details

Gene Information

• Locus tag: Avin_24540
• Symbol: kup
• ID: 7761368
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 2451524
• End bp: 2453422
• Gene Length: 1899 bp
• Protein Length: 632 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643805337
• Product: potassium uptake protein
• Protein accession: YP_002799614
• Protein GI: 226944541
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3158] K+ transporter
• TIGRFAM ID: [TIGR00794] potassium uptake protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.465778
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAAC TCGCGCTGCA GTCGAACCAC CGGCCCCAGG CCTCATCCGC GCTGGGCCTG 
CTGGTCGCCG CCACCGGTGT GGTCTACGGC GATATCGGTA CCAGCCCGTT GTATACCCTG 
AAGGAAGTGT TCGCCGGTCA TTACGGGGTG CGGGCCGACC ACGACGGGGT GCTCGGCGTT 
CTGTCGCTGA TTTTCTGGTC GCTGATCTGG GTGGTGTCGC TCAAGTACGT GTCGTTCATC 
CTGCGCGCCG ACAACGACGG CGAGGGCGGC GCGATGGCGC TGACCGCCCT GGCCCGCGGC 
GCCACCGCCG CTCACCCGCG CCTGAGCCGG GCGCTGGTGC TGCTCGGTCT GTTCGGCGTC 
GCGCTGTTCT ATGGCGACAG CGTGATCACG CCGGCGATCT CCGTGCTGTC GGCGGTCGAG 
GGCCTGGAGC TCGCCTTCGC GGGGCTGGAG CAGTGGGTGA TTCCCCTGGC GCTCGCGGTG 
CTGATCGCCC TGTTCCTGAT CCAGCGGCAC GGCACGGCGC GCATCGGCAC CCTTTTCGGC 
CCGGTGATGG TCGCCTGGTT CGTCGTGCTC GGCCTGCTCG GCCTGTACGG CATCCTGCAG 
CGGCCCGAAG TGTTGCTGGC GCTCAATCCC TGGTGGGCGG CGAACTTCTT CATCGTCCAT 
CCGGGGCTCG GCGTGGCCAT CCTCGGCGCG GTGGTGCTGG CGCTGACCGG CGCCGAGGCG 
CTGTATGCCG ACATGGGCCA CTTCGGCCGC CGGCCCATCG CCCGTGCCTG GTTCCTGCTG 
GTGCTGCCGG GACTGGTGCT CAACTATTTC GGCCAGGGCG CGCTGCTGCT GGCGGACCCG 
GAGGCGGCGC GCAACCCCTT CTATCTGCTG GCGCCCGGCT GGGCCCTGCT GCCGATGATC 
GCGCTCGCCA CCTTGGCCAC CATCATCGCC TCCCAGGCAG TGATTTCCGG CGCTTTTTCC 
CTGACCCGCC AGGCGATCCA GCTCGGCTAC GTGCCGCGCA TGCAGGTCCA GCACACTTCC 
AGCGCGGAGG AGGGGCAGGT CTACATCGGC GTGGTCAACT GGGCGCTGAT GGTCGGCGTG 
GTGCTGCTGG TGCTCGGCTT CGGCTCGTCC GGGGCGCTGG CCTCGGCCTA CGGCGTGGCG 
GTGACCGGCA CCATGCTGAT CACCACCCTG CTGGTGGCGG CGGTGATGCT GCTTTTGTGG 
AAGATGCCGC GCTGGCTGGC GGTCCCGCTG TTGCTGGGCT TCCTGCTGGT CGACAGCCTG 
TTCTTCGCCG CCAACGTGCC GAAGATCTTC CAGGGCGGGG CCTTCCCGGT GATCGCCGGG 
ATCGGCCTGT TCATCCTGAT GACCACCTGG AAACGCGGCA AGGAAACCCT GATCGAACGC 
CTGGGGGAAA GTGCCTTGCC GTTGCCGGCC TTCATCGACA GCGTGCGCCT GCAGCCGCCC 
CATCGGGTAC AGGGCACCGC GGTGTTCCTC GCCGCCCGAG CCGACGTGGT GCCCCATGCG 
TTGCTGCACA ACCTGCTGCA CAACCAGGTG CTGCACGAGC GGGTGGTGCT GCTCACGGTG 
GTTTCCGAGG ACACGCCGCG CGTGCCGGAA GAAAAGCGCT TCCAGGTCTA CAGCTACGGT 
GAGGGCTTCT ACCGCGTGGC ACTGCACTTC GGCTTCATGG AGGAGCCGGA CATTCCCGAC 
GCCCTGCGCC TGAGCCATCT GGAAAACCTC GACTTCAGCC CCATGCGCAC CACCTACTTC 
CTCAGCCGGG AAACCCTCAT CCCGACCCGG GGCATCGGCA TGGTCTACTG GCGCGAGGCC 
CTGTTCGTGT TCATGCAGAA GAACGCCAAC AGCAGCATGC GCTACTTCCA ACTGCCGGCG 
AACCGGGTGA TCGAGCTGGG GACGCAGGTG GAGATTTAG 

 

Protein sequence

MSELALQSNH RPQASSALGL LVAATGVVYG DIGTSPLYTL KEVFAGHYGV RADHDGVLGV 
LSLIFWSLIW VVSLKYVSFI LRADNDGEGG AMALTALARG ATAAHPRLSR ALVLLGLFGV 
ALFYGDSVIT PAISVLSAVE GLELAFAGLE QWVIPLALAV LIALFLIQRH GTARIGTLFG 
PVMVAWFVVL GLLGLYGILQ RPEVLLALNP WWAANFFIVH PGLGVAILGA VVLALTGAEA 
LYADMGHFGR RPIARAWFLL VLPGLVLNYF GQGALLLADP EAARNPFYLL APGWALLPMI 
ALATLATIIA SQAVISGAFS LTRQAIQLGY VPRMQVQHTS SAEEGQVYIG VVNWALMVGV 
VLLVLGFGSS GALASAYGVA VTGTMLITTL LVAAVMLLLW KMPRWLAVPL LLGFLLVDSL 
FFAANVPKIF QGGAFPVIAG IGLFILMTTW KRGKETLIER LGESALPLPA FIDSVRLQPP 
HRVQGTAVFL AARADVVPHA LLHNLLHNQV LHERVVLLTV VSEDTPRVPE EKRFQVYSYG 
EGFYRVALHF GFMEEPDIPD ALRLSHLENL DFSPMRTTYF LSRETLIPTR GIGMVYWREA 
LFVFMQKNAN SSMRYFQLPA NRVIELGTQV EI