Gene Avin_24350 details

Gene Information

• Locus tag: Avin_24350
• Symbol: cheW
• ID: 7761350
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 2428910
• End bp: 2429410
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643805320
• Product: Chemotaxis protein
• Protein accession: YP_002799597
• Protein GI: 226944524
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0835] Chemotaxis signal transduction protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.196922
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTTCCC TCAAGCAAGC CGATTTGGCG GCCACCGTGG CCGATACCCA TACCCGCGAA 
TTCCTGGTGT TCTCGCTGGG CAGCGAGGAA TACGCCATCG ACATCCTCAA GGCCCAGGAA 
ATCCGCAGCT ACGAGAACGT CACGCGGATC GCCAACACCC CGGACTTCAT CAAGGGGGTG 
ACCAACCTGC GCGGCGTGAT CGTGCCGATC GTCGACCTGC GCATCAAGTT CCACCTCGAG 
CGCGTCGAGT ACGGCGGGCA GACGGTGGTC ATCGTGGTCA ACGTCGAGGG GCGCGTGGTC 
GGCGTGGTGG TCGACGGCGT GTCCGACGTG ATCAGCCTGT CCCCCGAGCA GATCAAGCCG 
GCGCCCGAAT TCAGCCTGTC GCTGTCCTCC GATTATCTCA GCGGCCTGGC GAGCATCGGC 
GAGCGCATGC TGGTGCTGGT CGACATCGAC AAGCTGCTGA CCAGCGAGGA AATGGCCCTG 
GTGGAGAAGA CCGTGGCCTG A 

 

Protein sequence

MTSLKQADLA ATVADTHTRE FLVFSLGSEE YAIDILKAQE IRSYENVTRI ANTPDFIKGV 
TNLRGVIVPI VDLRIKFHLE RVEYGGQTVV IVVNVEGRVV GVVVDGVSDV ISLSPEQIKP 
APEFSLSLSS DYLSGLASIG ERMLVLVDID KLLTSEEMAL VEKTVA