| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_24230 |
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| Symbol | fliF |
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| ID | 7761338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 2417736 |
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| End bp | 2419466 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643805308 |
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| Product | flagellar M-ring protein |
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| Protein accession | YP_002799585 |
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| Protein GI | 226944512 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTAACG CGGTTGCCGG ACCGGGCACC GCGCTCGCCA CTCCCGCCCC GCCCCTCGTC
GAACGCCTGG TCGCACCGAT GCGCAGCCAG CCGCTGCTGC CGCTGATGCT GGCCGGCGCG
GCGGTGGTGG CGGTCGTCGC CGCCCTGCTG CTCTGGGCCC GCGAGCCCGA GTACCGGGTC
TTGTTCGCCA ACCTCGACGA GGCCGACGGC GGAAGGATCA TCGGCGAGCT GGACAGGCGC
GCCATTCCCT ATCGCCTGAG CGAAGGCGGC CACAGCCTGC TGGTGCCGGC CGACCAGTTG
CACACCCTGC GTCTGCAACT GGCCGAGCAG GGCCTGCCGC AGGGCGGCAA CGTCGGTTTC
GAGCTGCTCG ACAAACAGGC CTTCGGCGTC AGCCAGTTCG CCGAACAGAT CAACTTCCAG
CGCGGCCTGG AAGGCGAACT GGCACGCTCC ATCGAATCGC TCGGCCCGGT TTCGCGGGCC
CGCGTGCACC TGGCCATGGC CAAGCAGTCG GTGTTCGTCC GCGAGCGCGA GCCGGCGCGC
GCCTCGGTGG TGCTCAACCT GCAACCGGGC CGCGAACTGG GCGAGAGTCA GGTCAACGCC
ATCGCCCACC TGGTCTCCTC CAGTGTACCG GGGCTTTCCA TCGACGCGGT CACCGTGGTC
GACCAGAACG GCCGCCTGCT CTCCCGGCAG GGCGGCGCCC GCGACCTCGA CGGCACCCAA
CTGGACTATA TCGACGAGGT GGAACGCTCC TACCAGCGGC GCATCGAGAA CATCCTCGCG
CCGATCCTCG GCGCGCAGAA CGTCCGCGCC CAGGTGGTCG CGCAGATCGA CTTCGCCAGC
CGCGAACAGA CCGCCGAGCG CTACGCCCCC AACCAGCAGC CCGGCGAAGC GGCGGTGCGC
AGCCAGCAGC TCTCCGAGAA CCTGTCCGGC GGTACCGAGC TGGCCCGCGG GGTGCCCGGC
GCGCTGACCA ACAGCCCGCC GAACCCACCG CCGCCGCCCG CTCCCGCCGC GAACGAAACG
ACACAGACCG GCAATGCCGC CGGCACCGGG GGAACCGGCC AGGCCGCCGC CGCGGCCGCG
GAAAAGGCGC CCACCACGCT GAGCCGCGAC AACACGACCA ACTACGAGGT CGACCACAGC
GTCGAGCACG TGCAGTACCG GCGCGGCAGC GTGCAACGCC TGTCCGCCGC AGTGGTGGTC
AACTACCGCG ACGCGATCAA GGACGGCCAG ACCAGCCGCG AGCCGCTGAG CCAGGAGGAA
CTGGCGCGGA TCGACCGTCT GGTCCGCCAG GCCATGGGCT TCACGGACTC CCGCGGCGAC
CAGCTGGAAA TCATGAACAG CCCCTTCGCC GACAGCCTGG TCGTCGACCA GCAGGAATGG
TGGAAGACGC CGGAGTTCTA CAACCTGGCG ACCAGCCTGT CGCGCTACCT GCTGGTGGCC
TTCATCGCCC TGCTGCTCTG GCTGATGGTG CTGCGCCCGC TGAAGCGCCG CCACCGGGAG
AAGCTGGCCG CCGAAGCCAG CGCCAGGGCC GAGGCCGCCG AAGCCGCGCA ACTCGCCCTC
GAAGCCTCCC GGGTACCGGC CCTGGCCGCC GAGGAGAGCC AGCGGCGCGA CCTGCGGCGC
AAGTCGCCGA TCTATGAACA GAACCTGCAG AGCCTGCGCG AGATGGCCAA GGAAGACCCA
CGCCTGGTAG CCATGATCGT CCGCGGCTGG ATGAAGAAAG AAGAGAAATG A
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| Protein sequence | MSNAVAGPGT ALATPAPPLV ERLVAPMRSQ PLLPLMLAGA AVVAVVAALL LWAREPEYRV
LFANLDEADG GRIIGELDRR AIPYRLSEGG HSLLVPADQL HTLRLQLAEQ GLPQGGNVGF
ELLDKQAFGV SQFAEQINFQ RGLEGELARS IESLGPVSRA RVHLAMAKQS VFVREREPAR
ASVVLNLQPG RELGESQVNA IAHLVSSSVP GLSIDAVTVV DQNGRLLSRQ GGARDLDGTQ
LDYIDEVERS YQRRIENILA PILGAQNVRA QVVAQIDFAS REQTAERYAP NQQPGEAAVR
SQQLSENLSG GTELARGVPG ALTNSPPNPP PPPAPAANET TQTGNAAGTG GTGQAAAAAA
EKAPTTLSRD NTTNYEVDHS VEHVQYRRGS VQRLSAAVVV NYRDAIKDGQ TSREPLSQEE
LARIDRLVRQ AMGFTDSRGD QLEIMNSPFA DSLVVDQQEW WKTPEFYNLA TSLSRYLLVA
FIALLLWLMV LRPLKRRHRE KLAAEASARA EAAEAAQLAL EASRVPALAA EESQRRDLRR
KSPIYEQNLQ SLREMAKEDP RLVAMIVRGW MKKEEK
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