Gene Avin_24190 details

Gene Information

• Locus tag: Avin_24190
• Symbol: fliJ
• ID: 7761334
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 2414138
• End bp: 2414608
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643805304
• Product: flagellar export protein
• Protein accession: YP_002799581
• Protein GI: 226944508
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2882] Flagellar biosynthesis chaperone
• TIGRFAM ID: [TIGR02473] flagellar export protein FliJ

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00386348
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCACGA CCAGCGCGCT CGACACCCTC ATCGATCTGA CCCGCGAAGC CCTGGAGGCC 
GCCGGCCGCA CCCTGGCCGA CCAGCGCCGT ACCCAGCGGC AGGCCCAGGA ACAGATGAAC 
ACCCTCGAAC ATTACCGCCA GGAGTATCGC CAGCGCTTGC AGCAGGCCAT GCAGCAAGGC 
ATCGCCCCGG CCAGCCTGCA CAACTACCGG GCCTTCCTGG GCTCGCTGGA CGACGCCATC 
CAGCGCGCCG TGCAGACCCT CGACGCGCAG CGCCGGCAGG TCGACCACAG CCAGCGGCAC 
TGGCAGGAGC AGCGTCGCAA GCTGAACTCC TACGACACCC TGGTCGAGCG CCGCGCCCGG 
CTCGGTCAGT TGCGCGAGAA CCGCGCCGAA CAGCGCCGCA GCGACGAAAC CAGCGCCCAG 
TTGCGCCTGC GCCAAGGTGC TTCCAGCTTC CCGACCGACA GCAGCCTGTA A 

 

Protein sequence

MSTTSALDTL IDLTREALEA AGRTLADQRR TQRQAQEQMN TLEHYRQEYR QRLQQAMQQG 
IAPASLHNYR AFLGSLDDAI QRAVQTLDAQ RRQVDHSQRH WQEQRRKLNS YDTLVERRAR 
LGQLRENRAE QRRSDETSAQ LRLRQGASSF PTDSSL