Gene Avin_24180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_24180 
SymbolfliK 
ID7761333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2412743 
End bp2414128 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content75% 
IMG OID643805303 
ProductFlagellar hook-length control protein 
Protein accessionYP_002799580 
Protein GI226944507 
COG category[N] Cell motility 
COG ID[COG3144] Flagellar hook-length control protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0290673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATCA TCGCCCTGAC GGCCATGTCC GGCGCCGCGA CAAGCGCGCC ACCAAGCCCT 
TCGCCTGCCG CCAACGGCGG CGACTTCGCC CGCAGCCTCG AACAGGCGGC CGGCCGCCAG
GCGCCCAGCG CGGCCGCCGC CCAGCCCACT TCCCCGCGCG CCGCTGACGC GCAAACGCCG
GCCGCAACGC TCCTCGCCGC ACCGATGCCC CTCGCCATAT CGGCGTCCGT CTTGCCGAGC
CTGTCCCTGG CAGGTTCGGC CGCTGTGCCC GAGGCACAGG AAGAGGCCCC GGTGCACGCG
GACGAACTCC CTGAAGATAC CGTTGCCGAG CAGGTGGCCA TGCTCCTGCA AGCCCCGCTC
CCGTCGACTC CGGCACTACC GGCCGCCGCC GCCCCGAGCC TCGCGCAAAG CGACAGTTCC
GACGACCTGC AGCGCATCCG CTCGCGCCTG CAGGCGATCG AGAGCGCCGG ACAACTGCCG
CTCCCCGGCG CCGCCGGAGC GGCCCCGGCC GGCCAGCCGG CGCAAGTCAC CCAGTCTCCG
CCGACGGCCG GCGCTACGGC CGCCACGGTA ACCATGGGCG TCCCGGCGAA CATCGCGCAC
GCCCCCGGCC AGCCGGCGCA GTTCACCTCG TCTCCGCTGC CGGCTGGCGC GACAACCCCG
GGCACCCCGG CGAATGCCGC GCAATCCTCC GGCCAGGCGG CTTCCGCCGC TGTCGAGCAG
GACGGGCCGG CACTGCCCGA CGCGCCGGTC GCCGCCAGCC AGGGCCGGCC CGAATCCGCC
GCCGGGCAGA GCGGTCCCGC ACCGACGCCC GCCGAAGGCG CCTGGGCGGG CGAAAACCTC
GCTCCCAGCC TGGCAAGCAC GGCCGATGGC GCCACCTTCC CGCTCGCCGG CGCCAGCCTG
TCCGCCGGCG GCACGGCGAC AAGCAGTCCC GCCACGGCTG GCGCCTCCAC AGCCGCCAGC
CTGACGGCGC CGCTGGCCAG CCCCGAATGG CAGCGCGGCC TTGGCCAGCA CCTGCTCGGC
CTGCAACAGC GCGGCGAGCG GGAAATCGAA CTGCACCTGC ATCCGGCCGA ACTCGGCCCG
CTGTCGATCA GCCTCAAGAT CGGCGAGTCG GGCGCCCAGG CGCAGTTCCT CTCCGCCCAC
CCGCAGGTCC GCGCGGCGGT CGAGCAGGCC ATTCCGCAAC TGCGCGAAGC CCTCGCCGAG
CAGGGCATCG CCCTGGGCGA AACCTCGGTC GGCGAGCGCC AGCAACAGCA GCGGGACGAG
CGCCCGGCGA GCTGGAGCGG CGGCACGAGC CCGGCGGGCG GAGGTAACGA GGAAGCCGTG
CCCGGATCGC CCGAAACCGT CGCGCCGAGG CCGCTCCGCC TCGAAGGTAT CGACCTGTAC
GCCTGA
 
Protein sequence
MDIIALTAMS GAATSAPPSP SPAANGGDFA RSLEQAAGRQ APSAAAAQPT SPRAADAQTP 
AATLLAAPMP LAISASVLPS LSLAGSAAVP EAQEEAPVHA DELPEDTVAE QVAMLLQAPL
PSTPALPAAA APSLAQSDSS DDLQRIRSRL QAIESAGQLP LPGAAGAAPA GQPAQVTQSP
PTAGATAATV TMGVPANIAH APGQPAQFTS SPLPAGATTP GTPANAAQSS GQAASAAVEQ
DGPALPDAPV AASQGRPESA AGQSGPAPTP AEGAWAGENL APSLASTADG ATFPLAGASL
SAGGTATSSP ATAGASTAAS LTAPLASPEW QRGLGQHLLG LQQRGEREIE LHLHPAELGP
LSISLKIGES GAQAQFLSAH PQVRAAVEQA IPQLREALAE QGIALGETSV GERQQQQRDE
RPASWSGGTS PAGGGNEEAV PGSPETVAPR PLRLEGIDLY A