Gene Avin_24140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_24140 
SymbolfliO 
ID7761329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2410127 
End bp2410549 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content73% 
IMG OID643805299 
ProductFlagellar biosynthesis protein 
Protein accessionYP_002799576 
Protein GI226944503 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.452089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCG CCGCAACGAG CGCCCTGGAG AAGGGCGGCG CCGACAACCT GCTGGGCCTC 
GCCGCCCTGG GCAAGACCGC CCTGGCCCTG GCCCTGGTGG TCGGTTTGAT CTTCCTCTGC
AGTTGGCTGC TGCGCCGTTT CGGCCCCGGC CGCCACTGGC CCGGCCAGCA CCTGCGGGTG
ATCGGCAGCA GTCTGCTAGG CTCCCGCGAG CGGGTGGTGA TCGTCGAGGT GCAGGGTACC
TGGCTGGTGC TCGGCGTGAC CGCCCAGCAG ATCAGCAAGC TCCACGAACT GCCGGCGCCG
CCCGTCGAGG CGCGGGGCGG GGCTGGCGCA GTCCGTCCGG CCGGCGACTT CGCCAGCGCG
CTGAGCGAGC GACTCAAGCA GCACCTGTCC GGCCGCGAGA CCGGCAACCC GGAGCGACCA
TGA
 
Protein sequence
MSAAATSALE KGGADNLLGL AALGKTALAL ALVVGLIFLC SWLLRRFGPG RHWPGQHLRV 
IGSSLLGSRE RVVIVEVQGT WLVLGVTAQQ ISKLHELPAP PVEARGGAGA VRPAGDFASA
LSERLKQHLS GRETGNPERP