Gene Avin_24080 details

Gene Information

• Locus tag: Avin_24080
• Symbol: flgJ
• ID: 7761323
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 2404196
• End bp: 2405173
• Gene Length: 978 bp
• Protein Length: 325 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 643805293
• Product: flagellar rod assembly protein/muramidase
• Protein accession: YP_002799570
• Protein GI: 226944497
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1705] Muramidase (flagellum-specific)
• TIGRFAM ID: [TIGR02541] flagellar rod assembly protein/muramidase FlgJ

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.337249
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCACGG CGGCGCTCGG CGAGCGTTTC GCCCTCGACC TGCAGGGGCT GCAGCACCTC 
AAGCACACGG CTCGCGAGGA CTCGCCGGCC GCGCTGCGCG AGGCGAGCAA GCAGTTCGAG 
GCGCTGTTCC TGCAGGCCAT GCTGAAAAGC ATGCGCAAGG CCAGCCCGCA GTCGGGCCTG 
TTCGACAGCG AGCAGACCCG TCTCTACACC GAACTGCTGG ACCAGCAGTG GGCGCAGCAT 
CTGGCCGGCC GTGGCCTGGG ACTGGCCGAA CAGTTGGCCG GCCAGTTGCG CGGCACCGTC 
CAGGCCGCGG CTGCCGTGGA GAGCGCCAGG GAGGAAAACC TGCTGGCCGG GATTCCGCGC 
GCCACGCCGA AGGCGCTGTA CGGCGCGCTG GCGCCGTCGT CCCCCGGGAG CGGGCGGAGC 
GCTCGCTCGC CGGAGGATTC GCTGGGGGCC GTGGTGGAGC GTCCGGCCCA TGTCACGGAC 
TTCCTCGCCC GGCTGCGCGA GCCGGCGCAG CGCGCCAGCC GCGCCAGCGG CGTGCCCGCC 
GAACTGATCC TCGCCCAGGC GGCCCTGGAA ACCGGCTGGG GACGCCGGCA GATCGCCACG 
GCCGACGGCG GCGACAGTTA CAACCTGTTC GGCATCAAGG CCGGCAGCCG CTGGCGCGGC 
GCGACGGCCG ACGTGCTGAC CACCGAATAC GTCGACGGTC AGGCACAGAA ACGGGTGGAG 
CGTTTCCGTG CCTATCCGAC CCTGGATGCC GCGCTGTCCG ACTATGCCCG GCTGATCGGC 
GGCAATCCCC GTTACGCCGG GGTGGTCGCC GCGCCGGACG CGGCCCAGGC GGCGCGCGAG 
CTGCAACAGG CCGGCTATGC CACCGACCCG GCCTATGCCG ACAAGCTCAT CGCGGTCATG 
GCCAGCTTCG GACCGCTCGG CCAGACGCAG GAAGTCGCCC GCCTGGATGT GGACAACTCG 
CCGCGGACGG CCGACTGA 

 

Protein sequence

MATAALGERF ALDLQGLQHL KHTAREDSPA ALREASKQFE ALFLQAMLKS MRKASPQSGL 
FDSEQTRLYT ELLDQQWAQH LAGRGLGLAE QLAGQLRGTV QAAAAVESAR EENLLAGIPR 
ATPKALYGAL APSSPGSGRS ARSPEDSLGA VVERPAHVTD FLARLREPAQ RASRASGVPA 
ELILAQAALE TGWGRRQIAT ADGGDSYNLF GIKAGSRWRG ATADVLTTEY VDGQAQKRVE 
RFRAYPTLDA ALSDYARLIG GNPRYAGVVA APDAAQAARE LQQAGYATDP AYADKLIAVM 
ASFGPLGQTQ EVARLDVDNS PRTAD