Gene Avin_24060 details

Gene Information

• Locus tag: Avin_24060
• Symbol: flgH
• ID: 7761321
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 2402341
• End bp: 2403039
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643805291
• Product: Flagellar L-ring protein
• Protein accession: YP_002799568
• Protein GI: 226944495
• COG category: [N] Cell motility
• COG ID: [COG2063] Flagellar basal body L-ring protein

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAGGA ATAATCGAGT GCTTCGTGCA TGGCGGCTTC TCCCGGCCCG CGCCCTGCCG 
CTGGCCGCGC TGCTCCTGGC GGCCGGCTGC GCGCAACTGC CGCGGACCTC GGTGGTCAAG 
GACCAGCCGC TGGAGGTGCC GCAGATGCCG CTCAGGCAGG CCAACGGCTC CATCTTCCAG 
GTCGGTCACA TCTACCAGCC GCTGTTCGAG GACCGCCGGC CGCGGATGAT CGGCGACATC 
CTGACCATAG TGCTCAACGA GCAGGTCAGC GCCAGCAAGA ACTCGGCCTC CAACGCCAAC 
CGTTCCTCGG GCATGTCGCT GGGCTTCTCC ACGACCTCGG ACAAGCCGGA GAAGGTCGGC 
GAGTTCGGCG CCGAGGCCTC GGGCGACAAC GACTTTTCCG GCAGCGGCGG CTCGCGGGCG 
AACAACTCCT TCACCGGCAC CATCACCGTG ACCGTGCAGC AGGTGATGCC CAACGGCAAC 
CTGCGCGTGG TCGGCGAAAA ACAGATCGCC ATCAATCAGG GAACCGAGTA CATCCGCTTC 
TCCGGCCTGG TCAATCCGCG CACCATCACC GTACAGAACA CGGTGTCCTC GACCCTGGTG 
TCCATGGCCC GCATCGAATA CGTGGGCGAC GGCTACATCA ACGAGGCCCA GCACATGGGC 
TGGCTGCAGC GCTTCTTCCT CAACGTCTCT CCCTTCTGA 

 

Protein sequence

MARNNRVLRA WRLLPARALP LAALLLAAGC AQLPRTSVVK DQPLEVPQMP LRQANGSIFQ 
VGHIYQPLFE DRRPRMIGDI LTIVLNEQVS ASKNSASNAN RSSGMSLGFS TTSDKPEKVG 
EFGAEASGDN DFSGSGGSRA NNSFTGTITV TVQQVMPNGN LRVVGEKQIA INQGTEYIRF 
SGLVNPRTIT VQNTVSSTLV SMARIEYVGD GYINEAQHMG WLQRFFLNVS PF