Gene Avin_24040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_24040 
SymbolflgF 
ID7761319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2400745 
End bp2401500 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content71% 
IMG OID643805289 
Productflagellar basal-body rod protein 
Protein accessionYP_002799566 
Protein GI226944493 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGCA TGTTGTTCAC CGCCATGAGC GGCGCCAAGC AGAGTCTCGA CCAGCAGGCG 
GTGGTCGCGC ACAACCTGGC CAACGCGGTG ACTCCGGGTT TCCGCGCCCA GTTGATGGAG
CTGCAGGCCG TTCCGGTCGA CGGCGAGGGG CTGCCGACCC GCGTCTCGGT GCGTGCCACC
ACCTCCGGCG TCGATTTCAG CCAGGGGCCG GTCACCCGCA CCGGCCGTCC CTTGGACGTG
GCGCTCGACG GCAATGCCTG GCTGGCGATA CAGGCCGCCG ACGGCAGCGA GGCCTATACC
CGGCGTGGCG ACGTGCAGAT CGACGGCAAC GGCCTGATGA CGGTGGCCGG CCATCCGCTG
ATCGGCGACG GCGGCCCCCT GACGGTGCCC CTGGGCAGCC AGGTGAGCAT CGGCGCCGAC
GGTACCGTCA GCGTGGTGGA GGAGGGGCAG GACCCCGACA CCAGTGCCGT GGTGGCCCGC
CTGAAGCTGG TCAGCGCCGC TCCCGGAGAG CTGGAGCGCG GCGAGGACGG CCTGTTCCGC
GCGCCTCCGG ACGATACCGG CGTCTCCCAG CCGCTGGCGG TCGACGAGAC CGCCCGGCTG
GTCACCGGAG CCCTGGAGGG GAGCAACGTC AGCGCCACCG AAGCCATGGT GGCGATGATC
GACAACGCGC GGCGCTACGA GATGCAGATG AAGGCCATCG ACAGCGCCGA CGACAACGCC
CAGCGCGCCA ACGCCCTGCT GTCCCTGCAG GGCTGA
 
Protein sequence
MDRMLFTAMS GAKQSLDQQA VVAHNLANAV TPGFRAQLME LQAVPVDGEG LPTRVSVRAT 
TSGVDFSQGP VTRTGRPLDV ALDGNAWLAI QAADGSEAYT RRGDVQIDGN GLMTVAGHPL
IGDGGPLTVP LGSQVSIGAD GTVSVVEEGQ DPDTSAVVAR LKLVSAAPGE LERGEDGLFR
APPDDTGVSQ PLAVDETARL VTGALEGSNV SATEAMVAMI DNARRYEMQM KAIDSADDNA
QRANALLSLQ G