Gene Avin_24030 details

Gene Information

• Locus tag: Avin_24030
• Symbol: flgE
• ID: 7761318
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 2399580
• End bp: 2400731
• Gene Length: 1152 bp
• Protein Length: 383 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643805288
• Product: Flagellar basal body rod protein
• Protein accession: YP_002799565
• Protein GI: 226944492
• COG category: [N] Cell motility
• COG ID: [COG1749] Flagellar hook protein FlgE
• TIGRFAM ID: [TIGR03506] fagellar hook-basal body proteins

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCTTTT CCCAGGCACT CAGCGGCCTC AACGCCGCCT CCAGCAACCT CAACGTGGTC 
AGCAACAACA TCGCCAACTC GCAGACCGTC GGGTTCAAGA GTTCCACCAC CCAGTTCGCC 
GATGTCTACG CCAGCTCCAG GGTCGGCCTG GGCGTCCAGG TCGCCGGGGT GGTGCAGAAC 
TTCACCTCGG GCAACCTGGA AACCACCGAC CGCAGTCTGG ACCTGGCGAT CAGCGGCTCG 
GGCTTCTTCC GTTTCGAACA GGCCGGCCAG GTGGTCTATT CGCGCAACGG GCAACTGACC 
CTGACTCCCG AGGGTTACCT GCAGAACGCC CAGGGCGCAC GCCTGCTGGG CTCCAACGGG 
GCCATCCAGA TTCCCGCCGA CGGCCTGCAG GCCCAGCCGA CCACGGAATT CGACGCGACG 
CTCAACCTGG ATTCCGGCTC GGACGTGATC ACCGCCGCCT TCGATGCGAC CGACGAGAAC 
ACCTATTCCT ATGCGAATAC CGCCACGGTG TTCGACTCGC TGGGCAACTC CCACGAACTG 
ACCCTCTACT TCACCAAGAC CGGGACCAAC GAGTGGGCGG TCAATGCCGC CCTCGATGGC 
GCGGTTTCCG CCAGTGCCGC GCAGGCGCTC GAGTTCACCA CCAGCGGCCT GCTCGACGGC 
TATACGCCGA CCAGCTTCGA CTTCGCCATG ACCAATGGCG CCGCGGACAT CAGCTTCGAA 
CTCGACCTGA CCGGCAGCAC CCAGTTCGGC AACGACTTCG AGGTGTCCAG CCTTGACCAG 
GACGGCTACA CCGCCGGCAG CCTGGTGGGT TTCACCATCG AGGAGAACGG CAACGTCGTC 
GGCAACTATT CCAACGAACA GTCGCTGGTG GTCGGGCAGA TCCAACTGGC CACCTTCCGC 
AGCCCGGAGG GCCTGCAGCC GGTGGGCGAC AACGCCTGGG TGGAAACCGC GGCCTCCGGG 
CAACCGCTGG TGGGTACGGC CGGCAACGGC CAGTTCGGCT CCCTGGAGAG CGGCGTGGTG 
GAGGCTTCCA ACGTCGATCT GACCAAGGAA TTGGTGAACC TGATCATCGC CCAGCGCAAC 
TTCCAGGCCA ACGCCCAGTC GGTTTCGACC CAGAGCGAAG TGCTCGAACA GGCGGTCAAC 
CTCGGCCGCT GA 

 

Protein sequence

MGFSQALSGL NAASSNLNVV SNNIANSQTV GFKSSTTQFA DVYASSRVGL GVQVAGVVQN 
FTSGNLETTD RSLDLAISGS GFFRFEQAGQ VVYSRNGQLT LTPEGYLQNA QGARLLGSNG 
AIQIPADGLQ AQPTTEFDAT LNLDSGSDVI TAAFDATDEN TYSYANTATV FDSLGNSHEL 
TLYFTKTGTN EWAVNAALDG AVSASAAQAL EFTTSGLLDG YTPTSFDFAM TNGAADISFE 
LDLTGSTQFG NDFEVSSLDQ DGYTAGSLVG FTIEENGNVV GNYSNEQSLV VGQIQLATFR 
SPEGLQPVGD NAWVETAASG QPLVGTAGNG QFGSLESGVV EASNVDLTKE LVNLIIAQRN 
FQANAQSVST QSEVLEQAVN LGR