Gene Avin_23990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_23990 
SymbolflgA 
ID7761314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2397136 
End bp2397831 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content71% 
IMG OID643805284 
ProductFlagellar protein FlgA 
Protein accessionYP_002799561 
Protein GI226944488 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1261] Flagellar basal body P-ring biosynthesis protein 
TIGRFAM ID[TIGR03170] flagella basal body P-ring formation protein FlgA 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAGCC TCCCTCCGCT CCGCTTCCTT CTGACGGGAG CCCTGCCATG CCTGCTGGCC 
TGGCAACCGG CCTGGGCCGC GCCGGACCTG CTGGAAACCC GCGTCCGCGA GTTGATCGTG
CAGCGCCTGC CGCCCGGCGA GCGGCAGGAA CTGCGCATCG AACTCGAACG CCCGGCCGCC
GCCCTTCCCG ACTGCGAGGA CCCGCGGCCG TTCCTGCCGC AACCGAACCA GCGCCTGTCG
GGGCGGCTGG CGATAGGCGT CCAGTGCGCC GGCACGAACC AGCCCGCCCG CTACCTGCAG
GCCAGCGTCG GCATCCTCGG AGAATATGCG ATCGCCCGGC GCGCGATAGA ACCCGGCGAA
ACCGTCGAGG CGGACATGCT CGCGATGCGC CGGGGACGCC TGGAGCGCCT GCCACGCAAC
GCGGCCATTA CCACCGACGA GATCCTCGGC ATGCAGGCCA CCCGCGCCAT CGCCGAAGGC
AGCACCTTCC AGCGCAGCGC CCTGCGCGCG CCCGAACTGA TCGAGCGCAA TGCCCAGGTC
GTCCTCGAAG CCCGGGGACC CGGCTTCGTC ATCAGCCGGA AAGCCACCGC GCTCGACAGC
GGCGCTCTGG ACAGCCTGGT GCGAGTGCGC ACCGAAGCGG GGGAAATACT GCGTGGCAGG
GTCGTCGGCC GCAACCGGCT GCAGGCCGCC CAGTGA
 
Protein sequence
MSSLPPLRFL LTGALPCLLA WQPAWAAPDL LETRVRELIV QRLPPGERQE LRIELERPAA 
ALPDCEDPRP FLPQPNQRLS GRLAIGVQCA GTNQPARYLQ ASVGILGEYA IARRAIEPGE
TVEADMLAMR RGRLERLPRN AAITTDEILG MQATRAIAEG STFQRSALRA PELIERNAQV
VLEARGPGFV ISRKATALDS GALDSLVRVR TEAGEILRGR VVGRNRLQAA Q