| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_23820 |
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| Symbol | speE |
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| ID | 7761297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 2383741 |
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| End bp | 2384601 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643805266 |
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| Product | spermidine synthase |
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| Protein accession | YP_002799544 |
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| Protein GI | 226944471 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACT ATCAGGAAAC TCTCTACGAA GGCTACGGCC AGCGTTTTCG CATGGACAGG
CTGCTCCATG AAGTGCGTAC CGGGCACCAG CATCTGGTGA TCTTCGAGAA TGCCCGCATG
GGGCGGGTGA TGGCCCTGGA CGGAGTGATC CAGACTACCG AGGCCGATGA GTTCATCTAC
CACGAAATGC TCACCCATGT GCCGATTCTC GCCCATGGCG CGGCACGGCG CGTGCTGATC
GTCGGCGGCG GCGATGGCGG TATCCTGCGC GAGGTGTGTC GGCACCGGAG CGTCGAACGG
ATCACCATGG TCGAGATCGA TGCCACCGTG GTGGAGATGT GCAAGGAGTT CCTGCCCGAA
CACTCCAGAG GAGCCTTCGA AGACCCTCGC CTGAACCTGG TGATCGACGA CGGCATGCGC
TTCGTCGCCA CCACCGAGGA CAGGTTCGAC GTCATCATTT CCGACTCCAC CGACCCCATC
GGGCCGGGCG AGGTGCTGTT CTCCGAGAAC TTCTACCAGG CCTGCCGGCG CTGCCTGAAC
GACGGCGGCA TCCTGGTCAC CCAGAACGGT ACGCCGTTCA TGCAACTGGG CGAAGTGCAG
ACCACCGCGC AGCGAATGAA CGGACTGTTC GCCGACTGGC ACTTCTATCA GGCTGCGGTG
CCGACCTATA TCGGCGGGGC CATGACCTTC GCCTGGGGGG CCTGCGACGC CGCCTCGCGT
CGCCTGCCGC CGGACATCTT GCGTCAGCGC TTCGTCGGCA GCGGTATCGT GGCGCGCTAT
TACAACCCGG AAATTCATCA GGGTGCCTTT GCCCTGCCGC AGTACGTGCT GCAGGCCATC
GGCAAGCCCG GCAACAATTG A
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| Protein sequence | MSDYQETLYE GYGQRFRMDR LLHEVRTGHQ HLVIFENARM GRVMALDGVI QTTEADEFIY
HEMLTHVPIL AHGAARRVLI VGGGDGGILR EVCRHRSVER ITMVEIDATV VEMCKEFLPE
HSRGAFEDPR LNLVIDDGMR FVATTEDRFD VIISDSTDPI GPGEVLFSEN FYQACRRCLN
DGGILVTQNG TPFMQLGEVQ TTAQRMNGLF ADWHFYQAAV PTYIGGAMTF AWGACDAASR
RLPPDILRQR FVGSGIVARY YNPEIHQGAF ALPQYVLQAI GKPGNN
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