| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_23490 |
|---|
| Symbol | |
|---|
| ID | 7761265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 2351929 |
|---|
| End bp | 2352348 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643805231 |
|---|
| Product | tRNA-hydroxylase |
|---|
| Protein accession | YP_002799512 |
|---|
| Protein GI | 226944439 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG4445] Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCGCGCC TGGCGCGCGA AGAGCTGCGC CATTTCGAGC AGGTGGCCGA ACTGATGAAA
AAGCGTGGCG TCGTCTACCG GCCGCTCAGT GCTTCGCTCT ACGCCCAGCG CCTGCACGCG
CATATCCGCA AGAGCGAGCC GGGTCGGCTG ATCGATACCT TGATCGTCGG CGCCTACATC
GAGGCTCGCT CCTGCGAGCG TTTCCATCGT CTGGCGCCAT TCCTCGACGA GGAACTGGGG
CGCTTCTACG TCTCGCTGCT CGCCTCGGAG GCGCGGCACT ATCAGGACTA TCTGGGCATG
GCCCGCCAGT ATGCCGGCGA GCCGATCGAC GAGCGCGTGG CCTTCTTCGC CGAGATCGAG
CGCCAGGCGA TCCTTGTCCC GGATACGGAG TTCCGTTTCC ATAGCGGTGC GTCGGCCTGA
|
|---|
| Protein sequence | MSRLAREELR HFEQVAELMK KRGVVYRPLS ASLYAQRLHA HIRKSEPGRL IDTLIVGAYI
EARSCERFHR LAPFLDEELG RFYVSLLASE ARHYQDYLGM ARQYAGEPID ERVAFFAEIE
RQAILVPDTE FRFHSGASA
|
|---|
| |