| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_23330 |
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| Symbol | oprF |
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| ID | 7761249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 2328791 |
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| End bp | 2329846 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643805215 |
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| Product | major outer membrane porin OprF |
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| Protein accession | YP_002799496 |
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| Protein GI | 226944423 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0169824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGA AAAACACCTT GGGCGCCATT ATTGGCTCGA TGGTCGCCGC ATCTTCGATC
AGCGCGCTGG CTCAGGGCCA GGGCGCAGTT GAGGTGGAAG CTTTCGCCAA GCACTGGTTC
AGCGATGAGA GTTCGCGCGA CTTCGAAAAC GATGAAGCCG AACTCTATGG TGCATCGATC
GGTTATTTTT TGACCGATGA TGTGGAGCTG GTCTTGTCGC ATGGCGTTTA CAGGGACGTC
ACTACCGATG AGCCGATTGG CGACGGCGGG CACAAGGACA TCAAGGGTGA ACTGACCTCC
ATCGATGCCC TCTATCACTT CGGCGAGCCC GGCGCAGGCC TTCGTCCCTA CGTTTCCGGC
GGCTTCGCCC ACCAGAGCAT CGGCCAGGCC CGTGGCGGCC GTAACAACAG CACCCTGGCC
AACGTCGGCG CCGGTCTGAA GTACTACTTC ACCGACATGC TTTACGCCCG GGCCGGTCTC
GAAGGCATGT ACAACTTCGA CGATGATCAG ACCGACTGGC AGGCTGGCGT GGGTATCGGT
CTGAACTTCG GTGGCAGCGG CGGGAAGCAG CAACCCGTTG CGGAGCCGGT TGCCGAGGTC
TGTGCCGACG TCGACAACGA TGGCGTCTGC GACAATGTCG ACCGCTGCCC GGATACTCCC
GCCAACACCA CCGTGAATGC CGAGGGCTGC ACCGCCGTCG CCGAGGTGGT GCGTGTCGAG
CTGGACGTCA AGTTCGACTT CGACAAGGCG CAGGTCAAGG AAGAAAGCTA TGCCGACATC
AAGAACCTGG CCGACTTCAT GAAGCAGTAT CCGCAGACCA ACACTACCGT GGAAGGTCAC
ACCGACTCCG TCGGTACGGA TGCCTACAAC CAGAAGCTGT CCGAGCGCCG TGCCAATGCG
GTGCGTGATG TTCTGGTCAA CGAGTATGGC GTGCAAGGCA GCCGCGTAGA TTCCGTCGGT
TACGGCGAAT CCCGTCCGGT GGCCGACAAC GCTACCGAGT CCGGTCGCGC TATCAACCGT
CGCGTGGAAG CGGAAGTGGA AGCCCAAGCC CAGTAA
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| Protein sequence | MKLKNTLGAI IGSMVAASSI SALAQGQGAV EVEAFAKHWF SDESSRDFEN DEAELYGASI
GYFLTDDVEL VLSHGVYRDV TTDEPIGDGG HKDIKGELTS IDALYHFGEP GAGLRPYVSG
GFAHQSIGQA RGGRNNSTLA NVGAGLKYYF TDMLYARAGL EGMYNFDDDQ TDWQAGVGIG
LNFGGSGGKQ QPVAEPVAEV CADVDNDGVC DNVDRCPDTP ANTTVNAEGC TAVAEVVRVE
LDVKFDFDKA QVKEESYADI KNLADFMKQY PQTNTTVEGH TDSVGTDAYN QKLSERRANA
VRDVLVNEYG VQGSRVDSVG YGESRPVADN ATESGRAINR RVEAEVEAQA Q
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