Gene Avin_23210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_23210 
SymbolprpB 
ID7761237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2316069 
End bp2316956 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content65% 
IMG OID643805203 
Product2-methylisocitrate lyase 
Protein accessionYP_002799484 
Protein GI226944411 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID[TIGR02317] methylisocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAGA CGTCTGCCGG GCAACGTTTC CGCGATGCCG TCGCCAGTGA ACATCCGCTG 
CAGGTGGTCG GCGCCATCAA TGCCAACCAT GCGCTGCTGG CCAAGCGTGC CGGCTTCAAG
GCCATCTACC TGTCCGGCGG CGGCGTGGCG GCCGGTTCCC TGGGCCTGCC GGACCTGGGC
ATCACCGGGC TGGACGACGT GCTGACCGAC GTGCGCCGCA TCACCGACGT ATGCGACCTG
CCGCTGCTGG TGGACGTCGA TACCGGATTC GGCTCCTCGG CCTTCAACGT CGCCCGTACC
GTCAAGTCGA TGATCAAGTT CGGTGCGGCC GCCATCCACA TCGAGGACCA AGTGGGCGCC
AAGCGCTGCG GTCACCGTCC GAACAAGGAA ATCGTTTCCC AGCAGGAGAT GGTCGACCGG
ATCAAGGCGG CCGTGGACGC CCGTACCGAC GACAGCTTCG TGATCATGGC GCGCACCGAC
GCGCTGGCGG TCGAGGGGCT GAACTCGGCG CTGGATCGCG CCGCCGCCTG CATCGAGGCG
GGCGCCGACA TGATCTTCCC CGAGGCGATC ACCGAACTGG CGATGTACAA GACCTTCGCC
GACCGGGTGA AAGCGCCGAT CCTGGCCAAC ATCACCGAGT TCGGCGCCAC GCCGCTGTAC
ACCACCCAGG AACTGGCCAA CGTCGACGTA TCCCTGGTGC TCTATCCGCT GTCGGCGTTC
CGCGCCATGA ACAAGGCGGC CGAGAACGTC TACACGGCGC TGCGCCGCGA CGGCACCCAG
AAGAACGTGA TCGACACCAT GCAGACCCGC ATGGAGCTTT ACGACCGCAT CAACTACCAC
GCCTTCGAGC AGCACCTCGA CGCATTGTTC GCAGCCAACA AGAAATGA
 
Protein sequence
MTQTSAGQRF RDAVASEHPL QVVGAINANH ALLAKRAGFK AIYLSGGGVA AGSLGLPDLG 
ITGLDDVLTD VRRITDVCDL PLLVDVDTGF GSSAFNVART VKSMIKFGAA AIHIEDQVGA
KRCGHRPNKE IVSQQEMVDR IKAAVDARTD DSFVIMARTD ALAVEGLNSA LDRAAACIEA
GADMIFPEAI TELAMYKTFA DRVKAPILAN ITEFGATPLY TTQELANVDV SLVLYPLSAF
RAMNKAAENV YTALRRDGTQ KNVIDTMQTR MELYDRINYH AFEQHLDALF AANKK