Gene Avin_23050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_23050 
Symbol 
ID7761221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2300989 
End bp2303490 
Gene Length2502 bp 
Protein Length833 aa 
Translation table11 
GC content71% 
IMG OID643805187 
Producthypothetical protein 
Protein accessionYP_002799468 
Protein GI226944395 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.636342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCTGC CCTTCCTGCG CCTGCTGAGC CTGGCCTTCC GCCAATTGCT GCGCGATGCC 
CGCGCCGGAG AATTGCGGGT GCTGTTCCTC GCCCTGCTGG TGGCGGTGAC GGCGACCACC
GCCATCGGTT ACTTCGGGGC GCGCCTGAAC GCCAGCATGC TGCTGCGCGC CACCGAATTC
CTCGGTGCCG ACCTGCGCCT GAGCGGCAGC TCTCCGGCCA CTGCGGAGCA GTTGGCGGCC
GGCACGACGC TCGGGCTGGA GCATGCCAGG GTCGTCGAGT TCTCCAGCGT GATCGCCACC
GACACGGCCA TTCAACTGGC CAGCGTCAAG GCCGCCGACA GCGCCTACCC CCTGCGCGGG
GAACTCAAGA GCGCTCCGGC CCCCTATCAG CCGGACACGC CGGGCCCGGG TCCCGCCCCG
GGCGAGGCCT GGGCCGAGAC ACGCCTGCTG GCGGCCCTGA GCCTCGAGGT CGGCGACAGC
ATCGAAGTGG GTGAAAAGTC ACTGCGCCTG ACCCGCGTCC TCACCCAGGA GCCGGACCGC
GCCGGCAACT TCTACAGCCT CACGCCGCGC GTGCTGATGC ATCTCGACGA CCTGGACGCC
ACCGGGGTGG TGCAGCCCGG CAGCCGGGTG CGCTACCGCG AGCTGTGGCG TGGCGCCCCG
GAGGCGCTCC AGGCCTATCG CCAGCAGGTG ACGCCGCTGC TCGCCGCCGA CCAGCGCCTG
GAGGATGCGC GCGCCGGCAA CCGACAGATC GGCAATGCGC TGGCGCGCGG CGAACGCTAC
CTGAATCTCG CGAGCCTGGC CGCGGTACTT CTGGCCGGAA TCGCCGTGGC CCTGTCGGCG
GCTCGCTTCG CGATCCGCCG CTTCGATGCC AGCGCCCTGC TGCGCTGCCT CGGCCTGTCG
CGCCGAGCCA CCCTCGCCCT CTACGGACTG CAGCTCGGCC TGCTCGGCCT GCTCGCCTGC
GGCCTGGGCG CCGCACTGGG CTGGCTCGCG CAGCAGGGTC TGTTCTGGCT GCTTCGAGAC
TTGCTGCCAG CCGAGGTCCC GGCCGGCGGC CTGATACCGG CGCTGGCCGG CGGCGCCACC
GGGCTGGTCG CCCTGGCCGG CTTCGCCCTG CCGCCACTCG CGGCCCTCGG CCGGGTACCG
CCGCTGCGGG TACTGCGCCG CGACCTCGTG CCGGTACCGC CCGCCGCCTG GCTGACCTAT
GGCATGGCCC TGCTGGCGCT CGGCCTGATC ATGTGGCGGC TCAGCCTGGA CCTGCGGCTG
ACCCTGGCCC TGCTCGGCGG TGGCCTGCTC GCCGCATTCG CCCTCGGCGC CCTGCTGCTG
TCCGGCCTGC GCACCCTGCG ACGTCTATTG GCCACGGCCC CCCTGGCCTG GCGGCTGGGA
ATCGGCCAGT TGCTGCGTCA CCCTCTCGCC GCCGCCGGGC AGGCGCTGGC TTTCGGCCTG
ATCCTGCTGG CCATGTCCCT GGTGGCCCTG CTGCGCAGCG AGTTGCTCGA TACCTGGCAG
AACCAGCTCC CGGAGCAGGC GCCCAATTAT TTCGCCCTGA ATGTTCTGCC CGCGGAAAAA
GAGCGCTTCA TGGCGGAGGT CGCGCGTATC GCCCCGCAGA GCGCTCCTCT CTATCCCGTG
GTGATGGGAC GTCTGACCGC CATCAACGGC GAACCGGTCA GGCAGATCGT CAGCAAGGAA
TCCAGCGGCG AACGCGCCAC CCAGCGCGAC CTCAACCTGA CCTGGGCCGA GCGGCTACCC
GCGGACAACC GCCTGAGCGC CGGCCAGTGG TGGGACCGGT TGGAGCACGG CGAACTGCCC
GGGGTCTCGG TCGAGGCCGA GCTGGCCAAG AACCTCGGGC TCGGACTCGG CGACCGCCTG
ACCTTCAGCG TCGGCGGCAT CACCCGCGAT GCACGGGTCA GCAGCCTGCG CGAAGTGCAC
TGGGACAGCT TCCAGCCGAA TTTCTACATG ATCTTCCAGC CCGGAACCCT GCAGGACCTT
CCGGCTACCT ACCTGACCAG CTTCTACCTG CCGCCCGGCC GGGACGCCGA AGTGGTGCGC
CTGGCACGCA GCTTCCCCAC GGTGACGCTG CTTCAGGTCG AGGCCCTGCT GGCTCAGTTG
CGCGGCATCC TCGCCCAGGT CACCCTGGCG GTGGAATACG TGTTGCTGTT CGTCCTCGCC
GCCGGCCTCT GCGTGCTGTT CGCCGGACTG CAGGCGACCC TCGACGAGCG CCTCCGCCAA
GGCGCCCTGC TACGCGCCCT GGGAGCCAGG CGGCGCCTGC TGGTTCAGAC CCGGCGCCTG
GAGTTCGCCC TGCTCGGGGC GTCCAGCGGC CTGCTCGCCG CGCTGGGTTG CGAACTGGTC
AGCGCGCTGC TTTACCGCTT CGTCTTCGAT CTACCCTGGC ATCCCCATCC CTGGCTGCTG
CTGCTGCCGG CGCTCGGCGC ACTGCTGGTG GGCGCCGCCG GGCTGCTGGG CACGCAGCGA
GCCCTGAACG CCAGCCCGCT GCAGGTCCTG CGGGAGGGTT GA
 
Protein sequence
MDLPFLRLLS LAFRQLLRDA RAGELRVLFL ALLVAVTATT AIGYFGARLN ASMLLRATEF 
LGADLRLSGS SPATAEQLAA GTTLGLEHAR VVEFSSVIAT DTAIQLASVK AADSAYPLRG
ELKSAPAPYQ PDTPGPGPAP GEAWAETRLL AALSLEVGDS IEVGEKSLRL TRVLTQEPDR
AGNFYSLTPR VLMHLDDLDA TGVVQPGSRV RYRELWRGAP EALQAYRQQV TPLLAADQRL
EDARAGNRQI GNALARGERY LNLASLAAVL LAGIAVALSA ARFAIRRFDA SALLRCLGLS
RRATLALYGL QLGLLGLLAC GLGAALGWLA QQGLFWLLRD LLPAEVPAGG LIPALAGGAT
GLVALAGFAL PPLAALGRVP PLRVLRRDLV PVPPAAWLTY GMALLALGLI MWRLSLDLRL
TLALLGGGLL AAFALGALLL SGLRTLRRLL ATAPLAWRLG IGQLLRHPLA AAGQALAFGL
ILLAMSLVAL LRSELLDTWQ NQLPEQAPNY FALNVLPAEK ERFMAEVARI APQSAPLYPV
VMGRLTAING EPVRQIVSKE SSGERATQRD LNLTWAERLP ADNRLSAGQW WDRLEHGELP
GVSVEAELAK NLGLGLGDRL TFSVGGITRD ARVSSLREVH WDSFQPNFYM IFQPGTLQDL
PATYLTSFYL PPGRDAEVVR LARSFPTVTL LQVEALLAQL RGILAQVTLA VEYVLLFVLA
AGLCVLFAGL QATLDERLRQ GALLRALGAR RRLLVQTRRL EFALLGASSG LLAALGCELV
SALLYRFVFD LPWHPHPWLL LLPALGALLV GAAGLLGTQR ALNASPLQVL REG