Gene Avin_23040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_23040 
SymbolgreB 
ID7761220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2300440 
End bp2300937 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content66% 
IMG OID643805186 
Producttranscription elongation factor GreB 
Protein accessionYP_002799467 
Protein GI226944394 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01461] transcription elongation factor GreB 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGTT ATCGACCGCC CCGTTCCGCC GGAACGCCCC TGATCACCCC CGAAGGCGAA 
GCGCGTCTTC GCGCCGAACT CCACGAACTC TGGCACGTGC GCCGTCCGCA GGTCACCCAG
GCGGTCAGCG AGGCTGCCGC GCAGGGGGAT CGTTCGGAGA ACGCCGAGTA CACCTACGGC
AAGAAGATGC TGCGGGAAAT CGACAGCCGG GTACGCTTTC TCACCAAGCG ACTGGAGAAG
CTCCAGGTGG TCGGCGAGCG CCCCGCCGAC CTGAACAAGG TCTACTTCGG CGCCTGGGTC
ACCCTGGAGG ACGAGGACGG CGAACAGGTC CGCTACCGCA TCGTCGGCCC GGACGAACTG
GACCTGAAAC AGAACCTGAT CAGCATCGAC GCTCCGCTTG CCCGGGCCCT GGTCGGCAAG
GAACTGGACG CCGAGGTCCG GGTGCCGACG CCCACCGGAG AGAAGACCTG GTACCTGGTC
GCGATCGACT ACCCTTGA
 
Protein sequence
MSRYRPPRSA GTPLITPEGE ARLRAELHEL WHVRRPQVTQ AVSEAAAQGD RSENAEYTYG 
KKMLREIDSR VRFLTKRLEK LQVVGERPAD LNKVYFGAWV TLEDEDGEQV RYRIVGPDEL
DLKQNLISID APLARALVGK ELDAEVRVPT PTGEKTWYLV AIDYP