Gene Avin_23000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_23000 
Symbol 
ID7761216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2297412 
End bp2298224 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content69% 
IMG OID643805182 
ProductTatD-related deoxyribonuclease protein 
Protein accessionYP_002799463 
Protein GI226944390 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTCG TCGACATAGG CGTCAATCTG ACCCACCCCA GCTTCGCCCA CGACCGCGAA 
GCCCTGCTGG CCCGCGCCTA CCGGGCCGGG GTCTGCCAAC TGGTGCTGAC CGGTACCAGC
GTGGCGGACA GCGAACAGGC CTCGATGCTC TGCCGCCAAC TGGACGAAAC GGGCGAGCGC
CTGTTCGCCA CCGCCGGCGT CCATCCCCAC GACGCCCGTG AGTGGACGGC CGCCAGTGCC
CATCGGTTGC GCGAGCTGTT GCGGGAGGAG CGAATCCGCG CCGTCGGCGA GTGCGGCCTG
GACTTCAATC GCGACCTGTC CCCGCGCGCC CTGCAGGAAA AGGCCCTGGA AGAACAGTTG
GCGCTGGCCG TCGAGCTCGG CAAGCCGGTG TTCCTCCATG AACGCGATGC CAGCCAGCGC
CTGGTCGCGA TTCTCCGTCA CCATCGTGAC AGTCTGGCGG CCGCCGTGGT GCACTGCTTC
ACCGGTGACC GCCAAGCCCT CTTCGCCTAT CTCGACCTGG ACCTGCACAT CGGCATCACC
GGCTGGATCT GCGACGAACG CCGCGGCAGC CACCTGCACC CGCTGGTGCG GGAAATTCCC
GCCGGTCGGC TGATGCTGGA AAGCGACGCC CCCTATCTGC TGCCGCGCAC CCTGCGCCCC
AAGCCCAGGA GCGGGCACAA CGAACCGGCC TTCCTGCCCG AGGTGCTGCG CGAGGTCGCC
CGCCACCGCG GCGAGTCCGA GGAGGCGCTG GCCGAACACA GCACGGCCTG CGCCCGGCAC
TTCTTCGGCC TGCCCGAGAT CCTCGCATCC TGA
 
Protein sequence
MQLVDIGVNL THPSFAHDRE ALLARAYRAG VCQLVLTGTS VADSEQASML CRQLDETGER 
LFATAGVHPH DAREWTAASA HRLRELLREE RIRAVGECGL DFNRDLSPRA LQEKALEEQL
ALAVELGKPV FLHERDASQR LVAILRHHRD SLAAAVVHCF TGDRQALFAY LDLDLHIGIT
GWICDERRGS HLHPLVREIP AGRLMLESDA PYLLPRTLRP KPRSGHNEPA FLPEVLREVA
RHRGESEEAL AEHSTACARH FFGLPEILAS