Gene Avin_22520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_22520 
Symbol 
ID7761170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2250835 
End bp2251668 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content68% 
IMG OID643805137 
ProductABC transporter inner-membrane protein 
Protein accessionYP_002799418 
Protein GI226944345 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGC TTCAGGCTTC GGACCCGTTC CGCACCTTAC CGGCCCGCCC CTGGCCGACT 
TTCGCCCGCA TCCTGCGCCG GGCTGGCGCC GGAGGGGCCG GGCTGCTGCT GCCGGTGCTG
CTGCTGGTCG TCTGGCAGGT CGCTGTCGAG CGGCACTGGG TATCGGCGCA GATCCTGCCG
CCACCGTCGC GGGTGCTGGA AACCTTCGGC GAGCTGTGGG CGAGCGGCGA TCTCTGGTTC
CAGTTGTCGA TCAGCCTGCA GCGGGTGCTG GTCGGTTCGG CCATCGGTGG CGCCCTCGGC
CTGCTGCTCG GCCTCGCCAT GGGTCTGTCG CGCCGGGTCG AGGCCTATCT GCTGCCGCTG
TTCCAGGCGA TCAGCCAGGT GCCGGTGCTG GGCTGGATTC CGCTGCTGAT GATGCTGGTC
GGCATCGACG AGACGCTGAA GTACCTGGTG ATCGCCAAGG CGGTGCTGGT GCCGCTGACC
ATCAACACCT TCTCCGGTAT CCGCAACATC CCGCCGAGCT ACCTGGAGGT GGCCAGGGTG
TACCGCTTCG GGCTGCTGCT GCGCCTGCGC CGGGTGATCC TGCCGGCGGC GTTGCCGAGC
ATCTTCACCG GCGTGCGCTT CGCCCTCACC AAGGGCTGGA TCGCCCTGGT CACGGTGGAG
TTGCTGGCCT CCAGCGAGGG CATCGGCTAC CTGATGGTCG ATGGCCGGCA GATGTTCCAG
CTCGATCTGG TGATCGTCGC CATGCTGGTG ATCGGACTGG TCGGTCTGGT CCTCGACCAG
GGCTTGGCGC TGATCGAGAC CCGCCTGCGG CGCTGGCAGC GCCAGGCTTT CTGA
 
Protein sequence
MSTLQASDPF RTLPARPWPT FARILRRAGA GGAGLLLPVL LLVVWQVAVE RHWVSAQILP 
PPSRVLETFG ELWASGDLWF QLSISLQRVL VGSAIGGALG LLLGLAMGLS RRVEAYLLPL
FQAISQVPVL GWIPLLMMLV GIDETLKYLV IAKAVLVPLT INTFSGIRNI PPSYLEVARV
YRFGLLLRLR RVILPAALPS IFTGVRFALT KGWIALVTVE LLASSEGIGY LMVDGRQMFQ
LDLVIVAMLV IGLVGLVLDQ GLALIETRLR RWQRQAF