Gene Avin_22500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_22500 
Symbol 
ID7761168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2248546 
End bp2249619 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content68% 
IMG OID643805135 
ProductABC nitrate/sulfonate/bicarbonate family transporter protein 
Protein accessionYP_002799416 
Protein GI226944343 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACA AGTTGTTCCT TTCCCTCATC GCCGTGTTCG CCGGAGCCTG GCTGGGCGTG 
GCACCGGCCG GCGCCGCGGA CCCGCCGCAG GTGATCCGTT TCGGCCTGGC CACCGTCGGC
AAGGGGGGCA AGCCGGTCGC CTCCAACGGC ATCGCCAGTC TGGCCCACCA GCGCCAGGCC
ATCGAGGCCG AGCTGAAGGA CGACAACATC AGGATCGAGT GGATCTACTT CAAGGGCGCC
GGTCCCGCGG TCAACGAGGC GCTGGCCAAC AAGCAACTGG ATTTCGCCTG GCAGGGCGAC
CTGCCGGCGG TGATCGGCAA GGCCGGCGGC CTGAACACCC GGCTGATCGC CGCCGACGGC
CTGCTCACTT CCACCTATCT GGTGGTGCCG GTCGATTCGC CGGCGAAAAC CCTGCAGGAC
CTCAAGGGCA AGCGCGTGGC GCAGTTCAAG GGCACCAACC TGCAACTGGC CACCGCGCGC
GCGCTGAAGG TCGAGGGCCT GCGCGAACGC GACTTCCGCA CTATCAACAT GGACTTTCCC
ACCATGATCG CCGCACTGGC CTCCAAGGAC ATCGACGGCG GCTGGTTCGG CTCGCATGCC
TTCGACCTGC AGGCTTCCGG GGTCGGCCGG ATCGTCTACG ACACCCGCGC GGTCGACGCC
AAGCTGACCC GCCAGACCCA CGTGCTGGTG GACGGCGATT TCGAGCGCCA GTATCCGCAG
ATCGTGCAGA AGGTGGTCGA CGGGCTGGTC AAGACCGCCG CCTGGGTTTC CGCCGAGGAA
AACCGCGAGG CGGCCTTCGG CCTGTGGGCC AACTCCGGCA CACCGATCGA GGCGCTGCGC
GCCGAACAGG AAGGACAGTC CCTGGCGCGC ATCTATTCGC CGCGCCTCGA CGACTTCTTC
CTCGACCGCT ACCGCGCCAC GGTCCGCGAG TCCCGGGAGC TGGGCCTGCT GCGCGGCGAT
GTCGACGTCG ACCGCTGGGT CGAGCCCGGG TACGTGAACG CCGCCATCGA CCGGCTCGGC
CTGCAGACGC TGTGGCCGGT CTACGATGCC GACAACCGCC CGCAGGCCAG GTGA
 
Protein sequence
MKHKLFLSLI AVFAGAWLGV APAGAADPPQ VIRFGLATVG KGGKPVASNG IASLAHQRQA 
IEAELKDDNI RIEWIYFKGA GPAVNEALAN KQLDFAWQGD LPAVIGKAGG LNTRLIAADG
LLTSTYLVVP VDSPAKTLQD LKGKRVAQFK GTNLQLATAR ALKVEGLRER DFRTINMDFP
TMIAALASKD IDGGWFGSHA FDLQASGVGR IVYDTRAVDA KLTRQTHVLV DGDFERQYPQ
IVQKVVDGLV KTAAWVSAEE NREAAFGLWA NSGTPIEALR AEQEGQSLAR IYSPRLDDFF
LDRYRATVRE SRELGLLRGD VDVDRWVEPG YVNAAIDRLG LQTLWPVYDA DNRPQAR