Gene Avin_22420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_22420 
Symbol 
ID7761160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2241658 
End bp2242731 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content68% 
IMG OID643805127 
ProductABC nitrate/sulfonate/bicarbonate family transporter protein 
Protein accessionYP_002799408 
Protein GI226944335 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.853078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA ACAACCCCTT GGCCGCTCTG CTGCCCGGAC TGCTGAGCGC GGCCTTGCTG 
CTGGCGCCGC TGCCGCTCAA TGCCGAACCC GTGACCATCC GCTTCGGCGT CGCCCAGGTC
GGCAAGGGCG GCGTGCCCTT TTCCAGCAGC GGGGTGGCCG GCCTGGCCGA CCAGCGCAAG
GCCCTCCAGC AGGAGCTGGG CAGCGACGTG AATGTCGAGT GGTTCTACTT CAAGGGCGCC
GGCCCCGCAG TCAACGAGGC GCTGGCCAAC AAGCAACTGG ACTTCGCCGT GCAGGGCGAC
CTGCCGGCGG TGGTCGCCAA GGCCGGCGGC CTGGACACCC GGCTGATCAC CGCCGACAAC
CTGCTCACCT CGACCTACCT AGTGGTGCCG GCCGATTCTC CGGCCAAGAC CCTGCAGGAT
CTCAAGGGCA AGCGCGTGGC GCTGTTCAAG GGCACCAACC TGCACCTGGC GATCCTGCGC
GCGCTGAAGC GGCAGGGCCT CGGCGAACGC GACTTCCGCA CCCTCAACAT GGATTTCGCG
ACCATGGGCG CCGCGCTGAC CTCGAAGGAC ATCGACGGCG CCTGGTTCGA CGCGCGGGCC
TTCGACCTGC AGGCTTCCGG CGTCGGCCGG ATCATCTACG ACACCCGTGC CGTCGATCCG
CGCCTGACCC GCCAGGGCCA TGTGCTGGTG CGCGGCGAGT TCGAGCGGGA GCATCCCGAG
CTGGTGCAGA AGGTGGTGAC CGCGCTGGTC AAGACCGCGG CCTGGACCTC GGACCCGGCA
AACAAGGAAA CGGTGCTCTC GCTCTGGGCC AAGTCCGGAA CGCCGATCGA GGCGCTGCGC
GCCGAGCAGG AAGGGCAGTC GTTCCAGCGC CGCTATTCGC CGCTGCTGGA CGCGTTCTTC
GTCGACCGCT ACCGCGCCAC GGTGCAGGAG TCCAAGGAGC TGGGCCTGAT CCGCGGCGAC
GTCGACGTGG CCCGATGGAT CGAGCCGAAG TATGTCGACA CCGCCATCGA GCAACTCGGC
CTGCAGAAGC TGTGGACCCC CTACGACGCC GGAAATCGTC CCATCGTCCG CTGA
 
Protein sequence
MKKNNPLAAL LPGLLSAALL LAPLPLNAEP VTIRFGVAQV GKGGVPFSSS GVAGLADQRK 
ALQQELGSDV NVEWFYFKGA GPAVNEALAN KQLDFAVQGD LPAVVAKAGG LDTRLITADN
LLTSTYLVVP ADSPAKTLQD LKGKRVALFK GTNLHLAILR ALKRQGLGER DFRTLNMDFA
TMGAALTSKD IDGAWFDARA FDLQASGVGR IIYDTRAVDP RLTRQGHVLV RGEFEREHPE
LVQKVVTALV KTAAWTSDPA NKETVLSLWA KSGTPIEALR AEQEGQSFQR RYSPLLDAFF
VDRYRATVQE SKELGLIRGD VDVARWIEPK YVDTAIEQLG LQKLWTPYDA GNRPIVR