| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_22220 |
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| Symbol | |
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| ID | 7761140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 2220809 |
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| End bp | 2221375 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643805107 |
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| Product | Transcriptional regulator, LuxR family |
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| Protein accession | YP_002799388 |
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| Protein GI | 226944315 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.339277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGCAC TCACGCCCGC GCCCGGCGAT CTGGCGAGCC TGGCGTTCCG CGTTTCGCCG
GCGCCGCAGG TGATCACCGG AAATCGCCTG ATACTCGACT GCAACGAAGC GTTCCAATGC
CTGTTCGGCT ACGAGCGCCG GGAACTGCTC GGCCAGTCGA TCCTGCGCCT CTACCCCTCG
CGCGCCGACT ACCGGGCGAT CGGCGAGCGT TGCCTGAGCC GGCTGCGCCG GAGTCGCTCC
TACTCCGACG AACGCTTCAT GCAGCAGAGC GGCGGCGAAG TCTTCTGGGC GCACGCCGAC
GGCTACACGC TGACCCCCGA GGAGCCCTTC CGGCTGATGG TCTGGCACTT CGAGCGCATC
GACCGGCCCA TACGCGCGGC GGTGAACCTG ACGCCCCGCG AGCGGGAAAT CTCGGCGCAC
ATCGTCAACG GCCTCACCTG CAAGGAGATC GGCCGCAAGC TGGGCATTTC CCACCGCACC
GTGGAAGTGC ACCGGGCGCG CCTGATGAAG AAACTGGCGG CGAAGAACAG TGCCGATCTG
GTGTCGAAAA TCATCGTTCT GAACTGA
|
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| Protein sequence | MTALTPAPGD LASLAFRVSP APQVITGNRL ILDCNEAFQC LFGYERRELL GQSILRLYPS
RADYRAIGER CLSRLRRSRS YSDERFMQQS GGEVFWAHAD GYTLTPEEPF RLMVWHFERI
DRPIRAAVNL TPREREISAH IVNGLTCKEI GRKLGISHRT VEVHRARLMK KLAAKNSADL
VSKIIVLN
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