Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_22160 |
Symbol | rpiA-1 |
ID | 7761134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 2215359 |
End bp | 2216033 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643805101 |
Product | Ribose 5-phosphate isomerase |
Protein accession | YP_002799382 |
Protein GI | 226944309 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0120] Ribose 5-phosphate isomerase |
TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCAGG ATCAGCTTAA GCAGGCCGTG GCTCAGGCCG CCCTCGATCA CATCCTGCCG CATCTCACGC GGCAGAGCAT CGTCGGCGTC GGCACCGGCT CCACCGCCAA CTTCTTCATC GACCTGCTGG CCCGCCACCG GATGGACTTC GACGGCGCCG TGGCCAGTTC CGAGGCTACT GCCGCCCGTC TGAGGAGCCA TGGCATCGAA GTGCACGACC TGAACAGCAT CGCCGAGCTG GAGTTCTACG TGGACGGTGC CGACGAGTGC AACGGGCACC TGGAGCTGAC CAAGGGCGGC GGTGGCGCGC TGACCCGCGA GAAGATCGTC GCCGCGGTGG CCAAAACCTT CGTCTGCATC GCCGACGAGA GCAAGCGCGT CGATTTTCTC GGCGGTTTCC CGCTGCCGGT GGAGGTGATC CCCATGGCCC GTGGCCACGT GGCGCGCCAA CTGGTCATGC TGGGCGGTAA CCCGGTCCAT CGCGAAGGGG TGGTGACCGA CAACGGCAAC GTGATTCTCG ACGTGTACGA CATGCGGATC ATCGACCCCA GGCAATTGGA GTCGGATATC AACGGCATCG TCGGGGTGGT CTGCAACGGT CTGTTCGCCG CGCGCCCGGC CGACCTGCTG TTGCTCGGCA CCCATAACGG GGTCGAAAAG TTTGGACGTC GGTAA
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Protein sequence | MIQDQLKQAV AQAALDHILP HLTRQSIVGV GTGSTANFFI DLLARHRMDF DGAVASSEAT AARLRSHGIE VHDLNSIAEL EFYVDGADEC NGHLELTKGG GGALTREKIV AAVAKTFVCI ADESKRVDFL GGFPLPVEVI PMARGHVARQ LVMLGGNPVH REGVVTDNGN VILDVYDMRI IDPRQLESDI NGIVGVVCNG LFAARPADLL LLGTHNGVEK FGRR
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