Gene Avin_21780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_21780 
Symbol 
ID7761097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2177719 
End bp2178690 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content63% 
IMG OID643805064 
ProductTranscriptional regulator, LacI family 
Protein accessionYP_002799345 
Protein GI226944272 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGGTTT CGGCGCTGAC CGTCTCGCGT TTCTTCAATC ATCCCGAGCG GGTTTCGGAA 
GAACTGCGTC AGCGTATCGG CGAAGCCGTC TCGGCACTCG GCTATGTACC CAATCTGGTC
GCCGGCAGCC TCGCTTCCGC GCGCAGCCGT ATCGTCGGCA TGGTCATCCC GAATATTTCG
GGTCCCATCT TCGCCAATAC CATCCAGGGC TTCAGCGACA CCCTGAGCCG GCACGGATAC
CAGTTGCTGC TGGCCTCCAG CTACTTCTCG CCGGAACAGG AGGAAAATGC CGTGCGCGCT
TTTCTCGGCT GGTCGCCGGC CGCATTGGTG GTCACCAGTC ATTTCCATAG CGAGGGCACG
GAAAAACTTC TTGCCGGAAC GGACATCCCC GTGGTCGAGA TTTGGGATTA CCAACCCGAA
CGCGCGCCCA TTCAGGTCGG TTTCCAGCAC TACGATGTGG GGGAAATGGC GGTACGCCAT
CTGCTCGGCA AGGGTTACCG GCGCATCGCC TTCGTGCTGA ACAGCGCCGC CGGAGACTTC
AGCGCCTTGG ATAGGCGCGA TGGCTATGCG GCCATCCTGG AAGCCGCTGG ACTCCAGCCC
TGGAATTTCG TCCCCAGCAT CGGCAGCGCA CCTTTCGAGG CAGGCAAGGA GGCCATGGAA
ACGCTGATGC AGGGTACGCC GAAGCCCGAT GCGATCATTT TCGCCAATGA CAACCTGGCG
GCCGGCGGCC TGCTCGCCGC GCAACGCATG GGCCTGCGCA TCCCCGACGA TTGCGCTGTC
ATGGGGTTCG GCGACTACGC CTTCGCCCAC ATGCTGTTAC CGAGCCTGAG CACCATCCGG
CCACCGTCGC TGGCGATCGG TGAAATGGCT GCGCTGCGGG TATTGGAAAG CCTCGGGGCG
ATAGCCACGA CGCTGCCGGT GCAGCGCTTG AACCGGCTCG AATGCCAACT GGTCGAGCGG
GAAAGCACAT AG
 
Protein sequence
MGVSALTVSR FFNHPERVSE ELRQRIGEAV SALGYVPNLV AGSLASARSR IVGMVIPNIS 
GPIFANTIQG FSDTLSRHGY QLLLASSYFS PEQEENAVRA FLGWSPAALV VTSHFHSEGT
EKLLAGTDIP VVEIWDYQPE RAPIQVGFQH YDVGEMAVRH LLGKGYRRIA FVLNSAAGDF
SALDRRDGYA AILEAAGLQP WNFVPSIGSA PFEAGKEAME TLMQGTPKPD AIIFANDNLA
AGGLLAAQRM GLRIPDDCAV MGFGDYAFAH MLLPSLSTIR PPSLAIGEMA ALRVLESLGA
IATTLPVQRL NRLECQLVER EST