Gene Avin_21720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_21720 
Symbol 
ID7761092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2170715 
End bp2171650 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content66% 
IMG OID643805060 
ProductABC transporter, aliphatic sulfonate binding protein 
Protein accessionYP_002799341 
Protein GI226944268 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.716443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATGA AGACTTTCCG ATTCGGCATG CTTCTGTTTG GACTGTTGGC CTTCGCCCAA 
GTGTCGCTCG CCGATCCGAC GGTCTTACGC ATTGGCTACC AGAAAGCGTC GAGCAGTCTG
GTCCTGGCCA AGCAGCACGG CCTACTGGAG AAACGCTTTC CTCGAACTCG CATCGACTGG
ATCGAATTCC CTGCCGGTCC GCAGATGCTC GAGGCGCTGA ACATCGGCAG TCTGGATATC
GGCTCCACGG GCGACATCCC GCCGCTGTTC GCCCAGGCGG CCGGTGCCGA CCTGCTGTAC
ATCGGCGCCG AACCGCCCAA GCCACGGGCC GAAGTGATTC TGGTGGCGCC GGACAGCCCG
ATCCGCAGCG TCGCCGAGCT CAAGGGGCGC AAGGTGGCCC TGCAGAAAGG CTCCAGCGCG
CACAACTTGC TGCTGCGCGC GCTGGCGGCG GCCGGCCTGT CCTTCGTGGA TATCCAGCCG
GTCTACCTGC CGCCGGCCGA CGCCCGCGCC GCCTTCGAAA GCGGCCGGGT GGACGCCTGG
GCGATCTGGG ACCCCTTCTA TTCGGCCGTC GAACTGGAGG GACGCGCACG CCTGCTGGCC
AACGGCGAGG GCCTGGGGCT GCTCGGTCCG TTCTATCTGG CGGCACGTTC CTATGCCGAG
TCCGATCCGA ACTTCGTGAA AGCCGTGCTG GATGAGCTGG AGCAGGCGGA AAGACGGCTC
CAGAGCGACA GGGCCGGCAG CATCCGTCTG CTCGCCGGGT TCACCGGATT GCCGGAGGCG
GTGATCGAGC GGACGTTCAG CCATCGCCCG GTAGCGTCCG TCCTGCCCAT GAGTGCGGAA
ATCGTCGCCG CCCAGCAGCG CACTGCCGAC CTGTTCCTGG AAAACCGTCT GCTGCCGAAA
CGGGTGGATG TCTCCGCTGC CGTCTGGCGG CCATGA
 
Protein sequence
MKMKTFRFGM LLFGLLAFAQ VSLADPTVLR IGYQKASSSL VLAKQHGLLE KRFPRTRIDW 
IEFPAGPQML EALNIGSLDI GSTGDIPPLF AQAAGADLLY IGAEPPKPRA EVILVAPDSP
IRSVAELKGR KVALQKGSSA HNLLLRALAA AGLSFVDIQP VYLPPADARA AFESGRVDAW
AIWDPFYSAV ELEGRARLLA NGEGLGLLGP FYLAARSYAE SDPNFVKAVL DELEQAERRL
QSDRAGSIRL LAGFTGLPEA VIERTFSHRP VASVLPMSAE IVAAQQRTAD LFLENRLLPK
RVDVSAAVWR P