Gene Avin_21690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_21690 
Symbol 
ID7761089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2168659 
End bp2169060 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content65% 
IMG OID643805057 
ProductBiopolymer transport protein ExbD 
Protein accessionYP_002799338 
Protein GI226944265 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.57898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTTCT CGACCCAGGA AAGCGACGAA GTCCTCAGCG AGATGAACGT CACGCCGCTG 
GTCGACGTGA TGCTGGTGCT GCTGGTGGTG TTCATCGTCA CCGCGCCGAT GCTGACCAAC
AGCATCCCCA TCAACCTGCC CAAGACCGAG GCGGTCGCCC CGCCGGACAC CAAGGACCCG
CTGGTGGTGA GCATCGACGG CAGCGGCAAG CTGTTCATCA ACAAGGACGA GATCCAGCCC
GACCTGCTGG AAAGCAACCT GCAGGCGGCC AAGGCTGCGG ATGCCGAGCT GCGCGTGCAG
TTGCAGGCCG ACGACCAGGT GGACTACGGC GTGGTGGCCA GGGCCATGGC CGCCATCGAG
CGGGCGGGGA TCACCAAGCT CGCCGTCATT ACGGCGCGCT AA
 
Protein sequence
MAFSTQESDE VLSEMNVTPL VDVMLVLLVV FIVTAPMLTN SIPINLPKTE AVAPPDTKDP 
LVVSIDGSGK LFINKDEIQP DLLESNLQAA KAADAELRVQ LQADDQVDYG VVARAMAAIE
RAGITKLAVI TAR