Gene Avin_21580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_21580 
Symbol 
ID7761079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2158240 
End bp2159184 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content69% 
IMG OID643805047 
ProductD-isomer specific 2-hydroxyacid dehydrogenase 
Protein accessionYP_002799328 
Protein GI226944255 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGAA TCACCATCGC CAGCCAACTC GACGGCGAGG CGAACCGGTA TCTTCAGGCG 
CAATTGCCGG ACGAGCGGAT CGTCCAGCTG GAAAACCAGT CGCTGGCGGG CATTCCCGCC
GAAACCCGGG TACTCGTCGT GCGGCCGATC AATGTCCGCG GCGTGTCCCT GACCCATCCC
CCCGAGGGCT GGCCGTTCCG GCTGGAATGG GTGCAACTCG CTTCGTCCGG CATCGACGCC
TATCCCGACT GGCTGTTCGA GCTGCCCCGG GTGACCAGCG CCAAGGGGAC GGCGGCCCAT
GCCCTGGCCG AGTTCGCCCT GGCGGCGATC TTCTGTGCGG CCAAGCGCTT CCCGGAACTC
TGGGTCAAGG ACGCGCGCTG GGAACTGCAG CCGCTCGGAC AACTGCGCGG CAGCACGCTG
GGCATCCTCG GTTTCGGTTC GATCGGCCAG GTCCTCGCGG ACAAGGCCCT GGCGCTGGGC
ATGCGGGTGC TGGCGCTGCG CAAGGACAAC CGGCCCGTCG ATCATCCGGG CGTCGAGTCG
GCGCGGGACA TCCTCGATCT GGCCGAGCGT GCCGACCATC TGGTCATCGC CGCGCCCCTG
ACGCCCGAGA CGCGGCATCT GGTCGGCCGC GACGTGCTCG GGCGCGCCAG GGCGGGGCAG
CACCTGATCA ATATCGCCCG TGGCGGCCTG CTGGATCAGC AGGCGCTGCT GGAGGCCCTG
GACGCCGGCC GCCTGAGCCT GGCCACGCTC GATGTCACCG ACCCGGAGCC GCTGCCGTCG
GGGCATCCGC TCTACCGGCA TCCGCGGGTC AGGATTTCCC CGCACACCTC CGCCATCTCG
GCGGACAGCC AGAAGAACGT CGCCGCCCGC TTTCTCGAGA ACTTCGAGCG CTTCAAGGCG
CAGCGGGAGC TGATCGGCCT CGTGGACGTC GCCCGGGGCT ACTGA
 
Protein sequence
MSGITIASQL DGEANRYLQA QLPDERIVQL ENQSLAGIPA ETRVLVVRPI NVRGVSLTHP 
PEGWPFRLEW VQLASSGIDA YPDWLFELPR VTSAKGTAAH ALAEFALAAI FCAAKRFPEL
WVKDARWELQ PLGQLRGSTL GILGFGSIGQ VLADKALALG MRVLALRKDN RPVDHPGVES
ARDILDLAER ADHLVIAAPL TPETRHLVGR DVLGRARAGQ HLINIARGGL LDQQALLEAL
DAGRLSLATL DVTDPEPLPS GHPLYRHPRV RISPHTSAIS ADSQKNVAAR FLENFERFKA
QRELIGLVDV ARGY