Gene Avin_21510 details

Gene Information

• Locus tag: Avin_21510
• Symbol: metC
• ID: 7761074
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 2151126
• End bp: 2152292
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643805042
• Product: Cystathionine beta-lyase
• Protein accession: YP_002799323
• Protein GI: 226944250
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases
• TIGRFAM ID: [TIGR01324] cystathionine beta-lyase, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGACG ATGCGCGTAC CCGTCTGGTG CACGCCGCCC GTCCGCCGAA GGGCCCCGGC 
GGGCGGCCGG TCAATCCGCC GCTGACGCGC CTGAGCACCG TGCTGTTCGA CAGCGTCGGG 
GAAATGCGGG AAGTCCGCCG GCGCCGCGAC GGCGAACGCC TGCTGAGCTA CGGCGCGCGC 
GGCAATCCGA CCGCCTTCGC CCTGGAGGAT CTGGTCAGCG AACTGGAGGG CGGCTACCGC 
ACCAAACTGT TCCCCACCGG GCTGGCCGCC GCGGCGCAGA CGCTGCTCAG CTATCTGCGG 
CCGGGCGATC AGGTGCTGAT CACCGAGTCG GTCTATGCGC CGGTGCGCCG GGTGGCCAGC 
GAACTGCTCG AACCCTTCGG CATCGAGGTC GGCTATTTCG CCCCGGACGG CCGGGATCTC 
GAAGCGCACC TGCAAGCCAA CACGCGCATG GTCTATACCG AAGTGCCCGG CTCGCTGCTC 
TACGAACTGT GCGACCTGCC GGCCATCGCC GCCCTCTGCC GGCCGCGCGG CATCCTGCTG 
GCGGTCGACA ACACCTGGGG CTCCGGCTAT CTGTACCGGC CGCTGGCGCT GGGCGCGGAC 
ATTTCGGTCA TGGCGCTGAC CAAGTACCTG GGCGGACACG GCGATGTGGT CATGGGCAGC 
GCCTGTACCC GCGAGGAGGT CTGGCAACCG CTGTCGCGGA TGAGCGATGC CCTCGGCATC 
ACCGTCAGCC CGGACGACGC CTGGCTGGTG CTGCGCGGCG CGCGGACGCT GGCGGCGCGT 
CTGGAGGTAC ACGAACGCCA GGCGCTGGAG ATCGCTCGCT GGCTGCAGCG GCGCCCGGAG 
GTCGGCCGCG TCCATCATCC GGCCTTGCCC GAGCACCCAG GCCACGCGCT CTGGCGGCGC 
GATTTCGCCG GCAGCAACGG GCTGCTGTCG TTCGAGTTCG CCGAGGACGA TCCAGCGCTG 
GCCGCCCGTT TCGTCGATGC GCTGCGCCTG TTCGGCATCG GCGCCTCCTG GGGCGGCTAC 
GAGAGCCTGG CGATCCTCGC CGAACTGAGC GGACGCGGCG CCTTGCCGAC GACCGCCAGT 
TGCATCGTGC GCCTGCATAT CGGCCTGGAC GACAGCGCTT CCCTGATCGC CGATCTGGAG 
CAGGCGCTGA AAGCGGCGGT GGGCTGA 

 

Protein sequence

MNDDARTRLV HAARPPKGPG GRPVNPPLTR LSTVLFDSVG EMREVRRRRD GERLLSYGAR 
GNPTAFALED LVSELEGGYR TKLFPTGLAA AAQTLLSYLR PGDQVLITES VYAPVRRVAS 
ELLEPFGIEV GYFAPDGRDL EAHLQANTRM VYTEVPGSLL YELCDLPAIA ALCRPRGILL 
AVDNTWGSGY LYRPLALGAD ISVMALTKYL GGHGDVVMGS ACTREEVWQP LSRMSDALGI 
TVSPDDAWLV LRGARTLAAR LEVHERQALE IARWLQRRPE VGRVHHPALP EHPGHALWRR 
DFAGSNGLLS FEFAEDDPAL AARFVDALRL FGIGASWGGY ESLAILAELS GRGALPTTAS 
CIVRLHIGLD DSASLIADLE QALKAAVG